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  5. Pp3c1_31280V3.1

Pp3c1_31280V3.1


Description : ortholog of human splicing factor SC35


Gene families : OG0001859 (Archaeplastida) Phylogenetic Tree(s): OG0001859_tree ,
OG_05_0001512 (LandPlants) Phylogenetic Tree(s): OG_05_0001512_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_31280V3.1
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01009023001 No alias Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_14504 No alias Serine/arginine-rich splicing factor SC35 OS=Arabidopsis... 0.02 Archaeplastida
MA_10426661g0020 No alias Serine/arginine-rich splicing factor SC35 OS=Arabidopsis... 0.02 Archaeplastida
Mp3g01600.1 No alias Serine/arginine-rich splicing factor SC35 OS=Arabidopsis... 0.02 Archaeplastida
Mp3g22400.1 No alias Serine/arginine-rich splicing factor SC35 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g105140.3.1 No alias Serine/arginine-rich splicing factor SC35 OS=Arabidopsis... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!