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  5. Pp3c1_33790V3.1

Pp3c1_33790V3.1


Description : ABC transporter family protein


Gene families : OG0001462 (Archaeplastida) Phylogenetic Tree(s): OG0001462_tree ,
OG_05_0003606 (LandPlants) Phylogenetic Tree(s): OG_05_0003606_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_33790V3.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000383.51 No alias ABC transporter F family member 1 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cpa|evm.model.tig00020629.98 No alias ABC transporter F family member 3 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cre01.g023787 No alias ABC transporter F family member 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc11g069090.2.1 No alias ABC transporter F family member 1 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 401 531
IPR003439 ABC_transporter-like 90 245
IPR032781 ABC_tran_Xtn 284 361
No external refs found!