1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G25315

AT4G25315


Description : Expressed protein


Gene families : OG0006394 (Archaeplastida) Phylogenetic Tree(s): OG0006394_tree ,
OG_05_0006006 (LandPlants) Phylogenetic Tree(s): OG_05_0006006_tree ,
OG_06_0005734 (SeedPlants) Phylogenetic Tree(s): OG_06_0005734_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G25315
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00184890 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
MA_10428171g0010 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000339 RNA cap binding IEP Neighborhood
MF GO:0000340 RNA 7-methylguanosine cap binding IEP Neighborhood
CC GO:0000785 chromatin IEP Neighborhood
BP GO:0001510 RNA methylation IEP Neighborhood
BP GO:0002683 negative regulation of immune system process IEP Neighborhood
BP GO:0002697 regulation of immune effector process IEP Neighborhood
BP GO:0002698 negative regulation of immune effector process IEP Neighborhood
BP GO:0002831 regulation of response to biotic stimulus IEP Neighborhood
BP GO:0002832 negative regulation of response to biotic stimulus IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004407 histone deacetylase activity IEP Neighborhood
MF GO:0004648 O-phospho-L-serine:2-oxoglutarate aminotransferase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005742 mitochondrial outer membrane translocase complex IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Neighborhood
CC GO:0005758 mitochondrial intermembrane space IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006626 protein targeting to mitochondrion IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008320 protein transmembrane transporter activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0009165 nucleotide biosynthetic process IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0009853 photorespiration IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0019213 deacetylase activity IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0022625 cytosolic large ribosomal subunit IEP Neighborhood
CC GO:0022626 cytosolic ribosome IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022884 macromolecule transmembrane transporter activity IEP Neighborhood
MF GO:0030527 structural constituent of chromatin IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0031970 organelle envelope lumen IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0032101 regulation of response to external stimulus IEP Neighborhood
BP GO:0032102 negative regulation of response to external stimulus IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
MF GO:0033558 protein deacetylase activity IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0042887 amide transmembrane transporter activity IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043094 cellular metabolic compound salvage IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0043901 negative regulation of multi-organism process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044445 cytosolic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0050687 negative regulation of defense response to virus IEP Neighborhood
BP GO:0050688 regulation of defense response to virus IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:0070585 protein localization to mitochondrion IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072655 establishment of protein localization to mitochondrion IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098799 outer mitochondrial membrane protein complex IEP Neighborhood
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
MF GO:1904680 peptide transmembrane transporter activity IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR021475 DUF3128 48 106
No external refs found!