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  5. Pp3c1_3590V3.1

Pp3c1_3590V3.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0006219 (Archaeplastida) Phylogenetic Tree(s): OG0006219_tree ,
OG_05_0007562 (LandPlants) Phylogenetic Tree(s): OG_05_0007562_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_3590V3.1
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00216120 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
AT3G10530 No alias Transducin/WD40 repeat-like superfamily protein 0.06 Archaeplastida
Cpa|evm.model.tig00001366.4 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
Cre12.g502800 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 Archaeplastida
GSVIVT01034665001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.13 Archaeplastida
LOC_Os01g08770.1 No alias SSU processome assembly factor (UTP7) 0.11 Archaeplastida
MA_446g0040 No alias SSU processome assembly factor (UTP7) 0.06 Archaeplastida
Mp2g15260.1 No alias SSU processome assembly factor (UTP7) 0.12 Archaeplastida
Smo402172 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 Archaeplastida
Solyc05g008190.3.1 No alias SSU processome assembly factor (UTP7) 0.11 Archaeplastida
Zm00001e030145_P002 No alias SSU processome assembly factor (UTP7) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!