1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c1_36300V3.1

Pp3c1_36300V3.1


Description : nucleolin like 2


Gene families : OG0003954 (Archaeplastida) Phylogenetic Tree(s): OG0003954_tree ,
OG_05_0003386 (LandPlants) Phylogenetic Tree(s): OG_05_0003386_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_36300V3.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00090110 evm_27.TU.AmTr_v1... RNA biosynthesis.rRNA biogenesis.Nucleolin rDNA... 0.03 Archaeplastida
AT1G48920 PARL1, ATNUC-L1, NUC-L1 nucleolin like 1 0.06 Archaeplastida
Cre06.g275100 No alias RNA biosynthesis.rRNA biogenesis.Nucleolin rDNA... 0.06 Archaeplastida
GSVIVT01012042001 No alias RNA biosynthesis.rRNA biogenesis.Nucleolin rDNA... 0.05 Archaeplastida
Gb_32672 No alias rDNA chromatin transcription factor (NCL) 0.02 Archaeplastida
LOC_Os08g09350.1 No alias rDNA chromatin transcription factor (NCL) 0.02 Archaeplastida
MA_11380g0030 No alias rDNA chromatin transcription factor (NCL) 0.04 Archaeplastida
Mp1g21390.1 No alias rDNA chromatin transcription factor (NCL) 0.07 Archaeplastida
Smo234317 No alias RNA biosynthesis.rRNA biogenesis.Nucleolin rDNA... 0.02 Archaeplastida
Solyc02g014310.4.1 No alias rDNA chromatin transcription factor (NCL) 0.06 Archaeplastida
Zm00001e021609_P004 No alias rDNA chromatin transcription factor (NCL) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!