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  5. Pp3c1_37130V3.1

Pp3c1_37130V3.1


Description : No annotation


Gene families : OG0001640 (Archaeplastida) Phylogenetic Tree(s): OG0001640_tree ,
OG_05_0000990 (LandPlants) Phylogenetic Tree(s): OG_05_0000990_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_37130V3.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_14050V3.1 No alias No annotation 0.05 Archaeplastida
Pp3c10_17990V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c10_6200V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c11_8090V3.1 No alias ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 0.04 Archaeplastida
Pp3c11_8100V3.1 No alias No annotation 0.05 Archaeplastida
Pp3c12_1670V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c12_5040V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c13_16650V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c15_6480V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c16_16020V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c16_16730V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c1_29690V3.1 No alias methyl-CPG-binding domain 9 0.06 Archaeplastida
Pp3c1_32680V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c1_7530V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c20_20591V3.1 No alias No annotation 0.06 Archaeplastida
Pp3c20_9150V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c21_2620V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c21_3200V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c21_9670V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c22_11910V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c22_3600V3.1 No alias No annotation 0.05 Archaeplastida
Pp3c24_20860V3.1 No alias No annotation 0.07 Archaeplastida
Pp3c2_18690V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c3_26830V3.1 No alias No annotation 0.06 Archaeplastida
Pp3c7_25170V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c7_3390V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c8_21380V3.1 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006313 transposition, DNA-mediated IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0032196 transposition IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!