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  5. Pp3c1_37340V3.1

Pp3c1_37340V3.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0003862 (Archaeplastida) Phylogenetic Tree(s): OG0003862_tree ,
OG_05_0004743 (LandPlants) Phylogenetic Tree(s): OG_05_0004743_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_37340V3.1
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g16660.2 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.02 Archaeplastida
MA_10429304g0010 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.05 Archaeplastida
MA_10436035g0010 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 43 80
IPR001680 WD40_repeat 143 174
IPR001680 WD40_repeat 283 314
IPR001680 WD40_repeat 6 37
IPR001680 WD40_repeat 188 219
No external refs found!