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  5. Pp3c1_37710V3.1

Pp3c1_37710V3.1


Description : Clathrin, heavy chain


Gene families : OG0002049 (Archaeplastida) Phylogenetic Tree(s): OG0002049_tree ,
OG_05_0002345 (LandPlants) Phylogenetic Tree(s): OG_05_0002345_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_37710V3.1
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00168430 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.12 Archaeplastida
AT3G08530 No alias Clathrin, heavy chain 0.03 Archaeplastida
AT3G11130 No alias Clathrin, heavy chain 0.1 Archaeplastida
Cpa|evm.model.tig00000042.11 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 Archaeplastida
Cre02.g101400 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 Archaeplastida
GSVIVT01024708001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
GSVIVT01032792001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.1 Archaeplastida
Gb_33028 No alias heavy chain of clathrin triskelion 0.1 Archaeplastida
Gb_33029 No alias Clathrin heavy chain 2 OS=Arabidopsis thaliana... 0.08 Archaeplastida
LOC_Os11g01380.1 No alias heavy chain of clathrin triskelion 0.21 Archaeplastida
LOC_Os12g01390.1 No alias heavy chain of clathrin triskelion 0.14 Archaeplastida
MA_47260g0010 No alias Clathrin heavy chain 2 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Mp6g19660.1 No alias heavy chain of clathrin triskelion 0.04 Archaeplastida
Smo149750 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.12 Archaeplastida
Solyc03g096000.3.1 No alias heavy chain of clathrin triskelion 0.02 Archaeplastida
Solyc05g052510.4.1 No alias heavy chain of clathrin triskelion 0.15 Archaeplastida
Solyc06g051310.3.1 No alias heavy chain of clathrin triskelion 0.12 Archaeplastida
Zm00001e009296_P003 No alias heavy chain of clathrin triskelion 0.16 Archaeplastida
Zm00001e020822_P001 No alias heavy chain of clathrin triskelion 0.16 Archaeplastida
Zm00001e023940_P002 No alias heavy chain of clathrin triskelion 0.22 Archaeplastida
Zm00001e039167_P001 No alias heavy chain of clathrin triskelion 0.14 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!