1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c1_37980V3.1

Pp3c1_37980V3.1


Description : expansin B3


Gene families : OG0000383 (Archaeplastida) Phylogenetic Tree(s): OG0000383_tree ,
OG_05_0000369 (LandPlants) Phylogenetic Tree(s): OG_05_0000369_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_37980V3.1
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00266410 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.beta-type expansin 0.02 Archaeplastida
AT2G45110 ATHEXP BETA 1.1,... expansin B4 0.03 Archaeplastida
AT4G28250 EXPB3, ATEXPB3,... expansin B3 0.02 Archaeplastida
Gb_19114 No alias beta-like-class expansin 0.02 Archaeplastida
LOC_Os03g01610.1 No alias Expansin-B1 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os03g01640.1 No alias Expansin-B10 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os03g01650.1 No alias Expansin-B1 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os04g44780.1 No alias Expansin-B17 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os04g46650.1 No alias Expansin-B5 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os10g40090.1 No alias Expansin-B9 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os10g40700.1 No alias Expansin-B6 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os10g40710.1 No alias Expansin-B2 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os10g40730.1 No alias Expansin-B4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_10313796g0010 No alias Expansin-B16 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
MA_10427897g0010 No alias beta-class expansin 0.04 Archaeplastida
MA_166764g0010 No alias Expansin-B17 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_7765271g0010 No alias No annotation 0.03 Archaeplastida
MA_78155g0010 No alias Expansin-B17 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_9323664g0010 No alias Expansin-B3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c17_12970V3.1 No alias expansin B3 0.01 Archaeplastida
Pp3c17_12980V3.1 No alias expansin B3 0.02 Archaeplastida
Pp3c22_17770V3.1 No alias expansin B3 0.02 Archaeplastida
Smo234188 No alias Expansin-B16 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Solyc03g093390.4.1 No alias Expansin-B15 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Solyc05g052330.3.1 No alias Expansin-B5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Solyc10g008440.3.1 No alias beta-class expansin 0.04 Archaeplastida
Zm00001e000036_P001 No alias Expansin-B4 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e002335_P001 No alias Expansin-B3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e002337_P001 No alias Expansin-B3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e002338_P001 No alias Expansin-B2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e007438_P001 No alias beta-class expansin 0.03 Archaeplastida
Zm00001e015336_P002 No alias Expansin-B11 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e023169_P003 No alias Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e033407_P001 No alias Expansin-B11 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e036860_P001 No alias Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e036907_P001 No alias Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e037879_P001 No alias Expansin-B3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e037881_P001 No alias Expansin-B2 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e037884_P001 No alias Expansin-B6 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e037885_P001 No alias Expansin-B6 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e037914_P002 No alias Expansin-B9 OS=Zea mays (sp|q07154|expb9_maize : 487.0) 0.03 Archaeplastida
Zm00001e037919_P001 No alias Expansin-B1 OS=Zea mays (sp|p58738|expb1_maize : 482.0) 0.02 Archaeplastida
Zm00001e041519_P002 No alias Expansin-B5 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!