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  5. Pp3c1_38770V3.1

Pp3c1_38770V3.1


Description : Cyclin A1;1


Gene families : OG0000635 (Archaeplastida) Phylogenetic Tree(s): OG0000635_tree ,
OG_05_0000438 (LandPlants) Phylogenetic Tree(s): OG_05_0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_38770V3.1
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272790 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCA-type cyclin 0.04 Archaeplastida
AMTR_s00048p00184670 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCA-type cyclin 0.03 Archaeplastida
AMTR_s00068p00198800 No alias Cell cycle.regulation.cyclins.CYCA-type cyclin 0.05 Archaeplastida
AT1G15570 CYCA2;3 CYCLIN A2;3 0.03 Archaeplastida
AT1G44110 CYCA1;1 Cyclin A1;1 0.04 Archaeplastida
AT1G80370 CYCA2;4 Cyclin A2;4 0.05 Archaeplastida
AT5G43080 CYCA3;1 Cyclin A3;1 0.03 Archaeplastida
Cpa|evm.model.tig00000076.67 No alias Cyclin-A2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
GSVIVT01008823001 No alias Cell cycle.regulation.cyclins.CYCA-type cyclin 0.06 Archaeplastida
GSVIVT01009399001 No alias Cell cycle.regulation.cyclins.CYCA-type cyclin 0.03 Archaeplastida
GSVIVT01035718001 No alias Cell cycle.regulation.cyclins.CYCA-type cyclin 0.03 Archaeplastida
GSVIVT01037895001 No alias Cell cycle.regulation.cyclins.CYCA-type cyclin 0.03 Archaeplastida
Gb_03779 No alias cyclin (CYCA) 0.05 Archaeplastida
Gb_07594 No alias cyclin (CYCA) 0.04 Archaeplastida
Gb_10619 No alias cyclin (CYCA) 0.04 Archaeplastida
Gb_21011 No alias cyclin (CYCA) 0.03 Archaeplastida
LOC_Os01g13260.1 No alias cyclin (CYCA) 0.09 Archaeplastida
LOC_Os03g41100.1 No alias cyclin (CYCA) 0.09 Archaeplastida
LOC_Os12g20324.1 No alias cyclin (CYCA) 0.03 Archaeplastida
LOC_Os12g31810.1 No alias cyclin (CYCA) 0.03 Archaeplastida
LOC_Os12g39210.1 No alias cyclin (CYCA) 0.05 Archaeplastida
MA_103138g0010 No alias cyclin (CYCA) 0.02 Archaeplastida
MA_28323g0010 No alias cyclin (CYCA) 0.05 Archaeplastida
MA_6619g0010 No alias cyclin (CYCA) 0.03 Archaeplastida
MA_88982g0010 No alias cyclin (CYCA) 0.05 Archaeplastida
Mp2g25500.1 No alias cyclin (CYCA) 0.03 Archaeplastida
Pp3c2_8700V3.1 No alias Cyclin A1;1 0.05 Archaeplastida
Pp3c2_8780V3.1 No alias Cyclin A1;1 0.05 Archaeplastida
Smo442428 No alias Cell cycle.regulation.cyclins.CYCA-type cyclin 0.02 Archaeplastida
Smo97411 No alias Cell cycle.regulation.cyclins.CYCA-type cyclin 0.02 Archaeplastida
Solyc03g120440.3.1 No alias cyclin (CYCA) 0.04 Archaeplastida
Solyc04g078310.3.1 No alias cyclin (CYCA) 0.07 Archaeplastida
Solyc11g005090.2.1 No alias cyclin (CYCA) 0.04 Archaeplastida
Zm00001e013250_P002 No alias cyclin (CYCA) 0.03 Archaeplastida
Zm00001e017335_P001 No alias cyclin (CYCA) 0.05 Archaeplastida
Zm00001e039606_P001 No alias cyclin (CYCA) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!