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Description : phytochrome interacting factor 3
Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c1_38820V3.1 | |
| Cluster | HCCA: Cluster_160 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G02340 | HFR1, FBI1, REP1, RSF1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| AT2G43010 | SRL2, PIF4, AtPIF4 | phytochrome interacting factor 4 | 0.04 | Archaeplastida | |
| AT3G59060 | PIL6, PIF5 | phytochrome interacting factor 3-like 6 | 0.03 | Archaeplastida | |
| AT4G00050 | UNE10 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | Archaeplastida | |
| GSVIVT01018164001 | No alias | Transcription factor UNE10 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| GSVIVT01020814001 | No alias | External stimuli response.light.red/far red light.PIF... | 0.06 | Archaeplastida | |
| GSVIVT01028516001 | No alias | External stimuli response.light.red/far red light.PIF... | 0.03 | Archaeplastida | |
| LOC_Os03g56950.2 | No alias | transcription factor (bHLH). PIF red/far-red light... | 0.03 | Archaeplastida | |
| LOC_Os12g39850.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| LOC_Os12g41650.2 | No alias | transcription factor (bHLH). PIF red/far-red light... | 0.03 | Archaeplastida | |
| MA_10287127g0010 | No alias | transcription factor (bHLH). PIF red/far-red light... | 0.03 | Archaeplastida | |
| MA_167128g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_26114g0010 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| MA_488290g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_88831g0010 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Mp3g17350.1 | No alias | transcription factor (bHLH) | 0.04 | Archaeplastida | |
| Mp5g18910.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| Smo39143 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | Archaeplastida | |
| Zm00001e005046_P003 | No alias | transcription factor (bHLH). PIF red/far-red light... | 0.02 | Archaeplastida | |
| Zm00001e019392_P001 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002790 | peptide secretion | IEP | Neighborhood |
| CC | GO:0005887 | integral component of plasma membrane | IEP | Neighborhood |
| BP | GO:0009306 | protein secretion | IEP | Neighborhood |
| CC | GO:0031226 | intrinsic component of plasma membrane | IEP | Neighborhood |
| BP | GO:0032940 | secretion by cell | IEP | Neighborhood |
| CC | GO:0044459 | plasma membrane part | IEP | Neighborhood |
| BP | GO:0046903 | secretion | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |