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  5. Pp3c1_5570V3.1

Pp3c1_5570V3.1


Description : YebC-related


Gene families : OG0005588 (Archaeplastida) Phylogenetic Tree(s): OG0005588_tree ,
OG_05_0006413 (LandPlants) Phylogenetic Tree(s): OG_05_0006413_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_5570V3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT2G25830 No alias YebC-related 0.05 Archaeplastida
Cpa|evm.model.tig00020562.40 No alias Probable transcriptional regulatory protein At2g25830... 0.02 Archaeplastida
Cre02.g097550 No alias Probable transcriptional regulatory protein At2g25830... 0.02 Archaeplastida
LOC_Os05g44350.1 No alias Probable transcriptional regulatory protein At2g25830... 0.02 Archaeplastida
Mp1g23800.1 No alias Probable transcriptional regulatory protein At2g25830... 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!