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  5. Pp3c1_6010V3.1

Pp3c1_6010V3.1


Description : Pectin lyase-like superfamily protein


Gene families : OG0000078 (Archaeplastida) Phylogenetic Tree(s): OG0000078_tree ,
OG_05_0000108 (LandPlants) Phylogenetic Tree(s): OG_05_0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c1_6010V3.1
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264370 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00027p00247950 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
AMTR_s00056p00166920 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
AMTR_s00106p00092510 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
AMTR_s00116p00025230 evm_27.TU.AmTr_v1... Probable pectinesterase 8 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00123p00050980 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
AT1G11370 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT1G69940 ATPPME1, PPME1 Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT2G19150 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT2G36710 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT5G26810 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
GSVIVT01001327001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01013827001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01013838001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01014641001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01023786001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01028170001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01031250001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01034985001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Gb_01460 No alias pectin methylesterase 0.03 Archaeplastida
Gb_17798 No alias pectin methylesterase 0.04 Archaeplastida
Gb_23209 No alias pectin methylesterase 0.02 Archaeplastida
Gb_27225 No alias pectin methylesterase 0.02 Archaeplastida
Gb_32012 No alias pectin methylesterase 0.02 Archaeplastida
Gb_38324 No alias pectin methylesterase 0.03 Archaeplastida
Gb_39595 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g19440.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os01g53990.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os04g46740.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os05g44600.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os11g43830.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os11g45720.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os12g37660.1 No alias pectin methylesterase 0.03 Archaeplastida
MA_10267810g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_10428610g0010 No alias pectin methylesterase 0.04 Archaeplastida
MA_112715g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_14449g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_181657g0020 No alias pectin methylesterase 0.03 Archaeplastida
MA_19196g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_28575g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_40503g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_66089g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_6780346g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g00190.1 No alias pectin methylesterase 0.02 Archaeplastida
Mp2g01420.1 No alias pectin methylesterase 0.03 Archaeplastida
Mp3g01170.1 No alias pectin methylesterase 0.06 Archaeplastida
Mp5g03920.1 No alias pectin methylesterase 0.04 Archaeplastida
Mp5g03930.1 No alias pectin methylesterase 0.04 Archaeplastida
Pp3c10_18650V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c10_20120V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c12_24000V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c16_19430V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c18_13190V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c25_15080V3.1 No alias pectin methylesterase 31 0.03 Archaeplastida
Pp3c25_3840V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c25_760V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c3_30560V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c3_35040V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c5_12820V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c8_1440V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c8_2010V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c8_460V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Smo101090 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
Solyc01g079180.4.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc01g109740.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc02g075620.4.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc07g043240.4.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc09g091730.4.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc10g083820.2.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e002891_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e020795_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e027944_P002 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e032213_P001 No alias pectin methylesterase 0.01 Archaeplastida
Zm00001e033546_P001 No alias pectin methylesterase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!