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Description : ATP-dependent RNA helicase, putative
Gene families : OG0000159 (Archaeplastida) Phylogenetic Tree(s): OG0000159_tree ,
OG_05_0004210 (LandPlants) Phylogenetic Tree(s): OG_05_0004210_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c1_9270V3.1 | |
| Cluster | HCCA: Cluster_146 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00090p00083520 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.spliceosome... | 0.04 | Archaeplastida | |
| AMTR_s00110p00073830 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.spliceosome... | 0.04 | Archaeplastida | |
| AT1G26370 | No alias | RNA helicase family protein | 0.02 | Archaeplastida | |
| AT1G27900 | No alias | RNA helicase family protein | 0.02 | Archaeplastida | |
| AT1G32490 | ESP3, EMB2733 | RNA helicase family protein | 0.03 | Archaeplastida | |
| AT3G26560 | No alias | ATP-dependent RNA helicase, putative | 0.03 | Archaeplastida | |
| AT4G01020 | No alias | helicase domain-containing protein / IBR... | 0.03 | Archaeplastida | |
| AT4G18465 | No alias | RNA helicase family protein | 0.03 | Archaeplastida | |
| AT5G13010 | EMB3011 | RNA helicase family protein | 0.03 | Archaeplastida | |
| Cpa|evm.model.tig00000842.2 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00000984.27 | No alias | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.05 | Archaeplastida | |
| Cre07.g349100 | No alias | RNA processing.RNA splicing.spliceosome... | 0.06 | Archaeplastida | |
| Cre08.g358563 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | Archaeplastida | |
| GSVIVT01003434001 | No alias | ATP-dependent RNA helicase DEAH11, chloroplastic... | 0.02 | Archaeplastida | |
| GSVIVT01007911001 | No alias | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.04 | Archaeplastida | |
| GSVIVT01029863001 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.06 | Archaeplastida | |
| Gb_11931 | No alias | RNA helicase (Prp22) | 0.02 | Archaeplastida | |
| Gb_14269 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | Archaeplastida | |
| Gb_14270 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.04 | Archaeplastida | |
| Gb_22388 | No alias | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.03 | Archaeplastida | |
| Gb_30670 | No alias | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.03 | Archaeplastida | |
| LOC_Os01g11370.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.05 | Archaeplastida | |
| LOC_Os02g19860.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | Archaeplastida | |
| LOC_Os06g09280.1 | No alias | RNA helicase (Prp22) | 0.03 | Archaeplastida | |
| LOC_Os07g32430.1 | No alias | RNA helicase (Prp16) | 0.02 | Archaeplastida | |
| LOC_Os08g24760.1 | No alias | RNA helicase (Prp2) | 0.03 | Archaeplastida | |
| LOC_Os11g20554.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.05 | Archaeplastida | |
| MA_10434449g0010 | No alias | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.01 | Archaeplastida | |
| MA_10435486g0010 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | Archaeplastida | |
| MA_10435486g0020 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | Archaeplastida | |
| MA_10436572g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| MA_277016g0010 | No alias | RNA helicase (Prp2) | 0.02 | Archaeplastida | |
| Mp2g13680.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.04 | Archaeplastida | |
| Mp4g16380.1 | No alias | RNA helicase (Prp2) | 0.03 | Archaeplastida | |
| Mp7g03460.1 | No alias | RNA helicase (Prp16) | 0.02 | Archaeplastida | |
| Smo76120 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | Archaeplastida | |
| Solyc01g079250.3.1 | No alias | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.02 | Archaeplastida | |
| Solyc03g115390.4.1 | No alias | RNA helicase (Prp2) | 0.04 | Archaeplastida | |
| Solyc05g015040.4.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | Archaeplastida | |
| Solyc07g039550.4.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.04 | Archaeplastida | |
| Solyc09g008120.4.1 | No alias | RNA helicase (Prp22) | 0.02 | Archaeplastida | |
| Solyc10g076910.2.1 | No alias | RNA helicase (Prp16) | 0.05 | Archaeplastida | |
| Zm00001e001487_P003 | No alias | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.02 | Archaeplastida | |
| Zm00001e010450_P001 | No alias | RNA helicase (Prp16) | 0.04 | Archaeplastida | |
| Zm00001e014112_P001 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.04 | Archaeplastida | |
| Zm00001e016478_P002 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.04 | Archaeplastida | |
| Zm00001e022095_P001 | No alias | RNA helicase (Prp2) | 0.03 | Archaeplastida | |
| Zm00001e036358_P005 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
No InterPro domains available for this sequence
| No external refs found! |