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  5. Pp3c20_10200V3.1

Pp3c20_10200V3.1


Description : Lateral organ boundaries (LOB) domain family protein


Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_10200V3.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00142260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
AMTR_s00076p00127530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
AMTR_s00080p00153120 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
AT1G06280 LBD2 LOB domain-containing protein 2 0.03 Archaeplastida
AT1G07900 LBD1 LOB domain-containing protein 1 0.03 Archaeplastida
AT1G16530 LBD3, ASL9 ASYMMETRIC LEAVES 2-like 9 0.02 Archaeplastida
AT1G65620 AS2 Lateral organ boundaries (LOB) domain family protein 0.02 Archaeplastida
AT2G30130 LBD12, ASL5, PCK1 Lateral organ boundaries (LOB) domain family protein 0.02 Archaeplastida
AT2G30340 LBD13 LOB domain-containing protein 13 0.04 Archaeplastida
AT2G40470 LBD15, ASL11 LOB domain-containing protein 15 0.02 Archaeplastida
AT3G27650 LBD25 LOB domain-containing protein 25 0.01 Archaeplastida
GSVIVT01003548001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
GSVIVT01006269001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
GSVIVT01010625001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
GSVIVT01013631001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01024592001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01024662001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01025126001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
GSVIVT01032592001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
GSVIVT01032714001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
Gb_08465 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_10524 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_23794 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_40684 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
LOC_Os01g14030.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
LOC_Os05g07270.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
LOC_Os05g27980.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
MA_16646g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_19148g0010 No alias transcription factor (AS2/LOB) 0.01 Archaeplastida
MA_290245g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_66501g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_9412105g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc01g044520.2.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc02g069440.3.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc02g087570.1.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc02g090410.4.1 No alias transcription factor (AS2/LOB) 0.01 Archaeplastida
Solyc03g113360.4.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc06g082310.3.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Solyc06g082430.2.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Solyc12g010810.1.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e019424_P001 No alias transcription factor (AS2/LOB) 0.01 Archaeplastida
Zm00001e026736_P001 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e031510_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!