Pp3c20_10270V3.1


Description : bifunctional nuclease in basal defense response 1


Gene families : OG0001711 (Archaeplastida) Phylogenetic Tree(s): OG0001711_tree ,
OG_05_0001348 (LandPlants) Phylogenetic Tree(s): OG_05_0001348_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_10270V3.1
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00133450 evm_27.TU.AmTr_v1... Bifunctional nuclease 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G75380 BBD1, ATBBD1 bifunctional nuclease in basal defense response 1 0.02 Archaeplastida
Gb_36898 No alias Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g26870.1 No alias Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Mp1g11770.1 No alias Bifunctional nuclease 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c1_28640V3.1 No alias bifunctional nuclease in basal defense response 1 0.03 Archaeplastida
Pp3c1_7540V3.1 No alias Wound-responsive family protein 0.03 Archaeplastida
Pp3c2_9900V3.1 No alias bifunctional nuclease in basal defense response 1 0.03 Archaeplastida
Solyc04g080700.4.1 No alias Bifunctional nuclease 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e002828_P004 No alias Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003729 Bi_nuclease_dom 136 254
No external refs found!