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  5. Pp3c20_11500V3.1

Pp3c20_11500V3.1


Description : chromatin remodeling 5


Gene families : OG0000082 (Archaeplastida) Phylogenetic Tree(s): OG0000082_tree ,
OG_05_0014926 (LandPlants) Phylogenetic Tree(s): OG_05_0014926_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_11500V3.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00063470 evm_27.TU.AmTr_v1... Chromatin organisation.DNA methylation.RNA-independent... 0.09 Archaeplastida
AT2G25170 PKL, GYM, CHR6,... chromatin remodeling factor CHD3 (PICKLE) 0.03 Archaeplastida
AT5G18620 CHR17 chromatin remodeling factor17 0.04 Archaeplastida
AT5G66750 CHR01, CHR1,... chromatin remodeling 1 0.06 Archaeplastida
Cre03.g158550 No alias CHD3-type chromatin-remodeling factor PICKLE... 0.02 Archaeplastida
GSVIVT01018979001 No alias ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_16888 No alias ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os03g51230.2 No alias chromatin remodeling factor (DDM1) 0.03 Archaeplastida
LOC_Os06g08480.1 No alias chromatin remodeling factor (Chd3/Mi-2) 0.02 Archaeplastida
LOC_Os09g27060.1 No alias chromatin remodeling factor (DDM1) 0.05 Archaeplastida
MA_102992g0020 No alias Probable chromatin-remodeling complex ATPase chain... 0.03 Archaeplastida
MA_104034g0010 No alias chromatin remodeling factor (DDM1) 0.07 Archaeplastida
MA_42406g0010 No alias chromatin remodeling factor (DDM1) 0.03 Archaeplastida
Mp1g18560.1 No alias CHD3-type chromatin-remodeling factor PICKLE... 0.02 Archaeplastida
Mp4g12200.1 No alias chromatin remodeling factor (DDM1) 0.03 Archaeplastida
Pp3c17_19520V3.1 No alias chromatin remodeling 1 0.03 Archaeplastida
Smo102612 No alias Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana 0.08 Archaeplastida
Smo440203 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
Solyc01g079690.4.1 No alias chromatin remodeling factor (Snf2) 0.05 Archaeplastida
Solyc02g062780.4.1 No alias chromatin remodeling factor (DDM1) 0.07 Archaeplastida
Solyc02g085390.4.1 No alias chromatin remodeling factor (DDM1) 0.03 Archaeplastida
Solyc06g054560.3.1 No alias chromatin remodeling factor (Iswi) 0.09 Archaeplastida
Solyc08g029130.3.1 No alias chromatin remodeling factor (Chd3/Mi-2) 0.05 Archaeplastida
Zm00001e005517_P002 No alias chromatin remodeling factor (DDM1) 0.05 Archaeplastida
Zm00001e011541_P001 No alias chromatin remodeling factor (DDM1) 0.04 Archaeplastida
Zm00001e017643_P001 No alias chromatin remodeling factor (Iswi) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!