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  5. Pp3c20_16270V3.1

Pp3c20_16270V3.1


Description : COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family


Gene families : OG0000661 (Archaeplastida) Phylogenetic Tree(s): OG0000661_tree ,
OG_05_0000695 (LandPlants) Phylogenetic Tree(s): OG_05_0000695_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_16270V3.1
Cluster HCCA: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00083860 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.04 Archaeplastida
AMTR_s00047p00216570 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.04 Archaeplastida
AT1G09790 COBL6 COBRA-like protein 6 precursor 0.03 Archaeplastida
AT5G15630 IRX6, COBL4 COBRA-like extracellular glycosyl-phosphatidyl... 0.05 Archaeplastida
AT5G60920 COB COBRA-like extracellular glycosyl-phosphatidyl... 0.05 Archaeplastida
GSVIVT01008128001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.08 Archaeplastida
GSVIVT01008129001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.04 Archaeplastida
GSVIVT01036565001 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.04 Archaeplastida
Gb_25603 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
Gb_36719 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
Gb_36720 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.08 Archaeplastida
LOC_Os03g30250.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
LOC_Os03g30260.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.07 Archaeplastida
LOC_Os03g54750.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.11 Archaeplastida
LOC_Os05g32110.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.06 Archaeplastida
LOC_Os07g41320.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
MA_106654g0010 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Archaeplastida
MA_4056g0010 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
MA_40967g0020 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
MA_637485g0010 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.08 Archaeplastida
Mp7g06600.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.06 Archaeplastida
Pp3c12_4550V3.1 No alias COBRA-like protein 1 precursor 0.05 Archaeplastida
Pp3c2_9820V3.1 No alias COBRA-like protein 1 precursor 0.08 Archaeplastida
Smo271954 No alias Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.07 Archaeplastida
Solyc01g103860.4.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
Solyc01g103877.1.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida
Solyc02g065765.1.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.08 Archaeplastida
Solyc02g089130.4.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
Solyc03g070440.4.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
Solyc03g114880.3.1 No alias COBRA-like protein 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc03g114900.3.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.04 Archaeplastida
Zm00001e005710_P002 No alias No annotation 0.08 Archaeplastida
Zm00001e012022_P001 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.06 Archaeplastida
Zm00001e035505_P001 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.05 Archaeplastida
Zm00001e038043_P001 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!