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Description : RNA helicase, putative
Gene families : OG0001972 (Archaeplastida) Phylogenetic Tree(s): OG0001972_tree ,
OG_05_0003008 (LandPlants) Phylogenetic Tree(s): OG_05_0003008_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c20_16510V3.1 | |
| Cluster | HCCA: Cluster_286 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00071p00142490 | evm_27.TU.AmTr_v1... | RNA processing.RNA decay.Nonsense-Mediated mRNA Decay... | 0.04 | Archaeplastida | |
| AT5G47010 | UPF1, ATUPF1, LBA1 | RNA helicase, putative | 0.03 | Archaeplastida | |
| Cre02.g092500 | No alias | RNA processing.RNA decay.Nonsense-Mediated mRNA Decay... | 0.01 | Archaeplastida | |
| Cre03.g150350 | No alias | Regulator of nonsense transcripts 1 homolog... | 0.03 | Archaeplastida | |
| Cre09.g396139 | No alias | Regulator of nonsense transcripts 1 homolog... | 0.01 | Archaeplastida | |
| GSVIVT01013247001 | No alias | RNA processing.RNA decay.Nonsense-Mediated mRNA Decay... | 0.06 | Archaeplastida | |
| Gb_10553 | No alias | UPF1 Nonsense-Mediated mRNA Decay effector protein | 0.03 | Archaeplastida | |
| Gb_22830 | No alias | UPF1 Nonsense-Mediated mRNA Decay effector protein | 0.03 | Archaeplastida | |
| LOC_Os07g31340.1 | No alias | UPF1 Nonsense-Mediated mRNA Decay effector protein | 0.07 | Archaeplastida | |
| MA_10426702g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_10436671g0010 | No alias | Regulator of nonsense transcripts 1 homolog... | 0.05 | Archaeplastida | |
| Mp1g01200.1 | No alias | UPF1 Nonsense-Mediated mRNA Decay effector protein | 0.05 | Archaeplastida | |
| Solyc08g077420.3.1 | No alias | UPF1 Nonsense-Mediated mRNA Decay effector protein | 0.03 | Archaeplastida | |
| Zm00001e010427_P002 | No alias | UPF1 Nonsense-Mediated mRNA Decay effector protein | 0.08 | Archaeplastida | |
| Zm00001e035036_P001 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
No InterPro domains available for this sequence
| No external refs found! |