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  5. Pp3c20_20440V3.1

Pp3c20_20440V3.1


Description : Protein of unknown function (DUF3353)


Gene families : OG0002299 (Archaeplastida) Phylogenetic Tree(s): OG0002299_tree ,
OG_05_0001956 (LandPlants) Phylogenetic Tree(s): OG_05_0001956_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_20440V3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT3G51140 No alias Protein of unknown function (DUF3353) 0.06 Archaeplastida
Cpa|evm.model.tig00001154.33 No alias No description available 0.02 Archaeplastida
GSVIVT01008199001 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 Archaeplastida
Gb_19808 No alias light-dependent protochlorophyllide oxidoreductase... 0.05 Archaeplastida
Gb_26422 No alias light-dependent protochlorophyllide oxidoreductase... 0.04 Archaeplastida
LOC_Os09g21250.1 No alias light-dependent protochlorophyllide oxidoreductase... 0.05 Archaeplastida
Mp4g06910.1 No alias light-dependent protochlorophyllide oxidoreductase... 0.08 Archaeplastida
Solyc02g062350.3.1 No alias light-dependent protochlorophyllide oxidoreductase... 0.06 Archaeplastida
Solyc03g114470.2.1 No alias light-dependent protochlorophyllide oxidoreductase... 0.05 Archaeplastida
Zm00001e034018_P002 No alias light-dependent protochlorophyllide oxidoreductase... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!