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  5. Pp3c20_5000V3.1

Pp3c20_5000V3.1


Description : tRNA synthetase class II (D, K and N) family protein


Gene families : OG0004387 (Archaeplastida) Phylogenetic Tree(s): OG0004387_tree ,
OG_05_0005327 (LandPlants) Phylogenetic Tree(s): OG_05_0005327_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_5000V3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00135980 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 Archaeplastida
Cpa|evm.model.tig00000498.40 No alias Aspartate--tRNA ligase, chloroplastic/mitochondrial... 0.02 Archaeplastida
Cpa|evm.model.tig00000498.41 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 Archaeplastida
Cre09.g390986 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.11 Archaeplastida
GSVIVT01037036001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 Archaeplastida
Gb_20440 No alias aspartate-tRNA ligase 0.07 Archaeplastida
MA_9216541g0010 No alias aspartate-tRNA ligase 0.04 Archaeplastida
Mp1g01640.1 No alias aspartate-tRNA ligase 0.1 Archaeplastida
Smo140340 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 Archaeplastida
Zm00001e016877_P001 No alias aspartate-tRNA ligase 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004109 coproporphyrinogen oxidase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!