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  5. Pp3c20_7130V3.1

Pp3c20_7130V3.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0002119 (Archaeplastida) Phylogenetic Tree(s): OG0002119_tree ,
OG_05_0002343 (LandPlants) Phylogenetic Tree(s): OG_05_0002343_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_7130V3.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AT5G08390 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Archaeplastida
AT5G23430 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
LOC_Os01g57210.1 No alias regulatory component of Katanin ATP-dependent... 0.02 Archaeplastida
LOC_Os04g58130.1 No alias regulatory component of Katanin ATP-dependent... 0.02 Archaeplastida
MA_12868g0010 No alias regulatory component of Katanin ATP-dependent... 0.02 Archaeplastida
MA_19913g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_97731g0010 No alias regulatory component of Katanin ATP-dependent... 0.06 Archaeplastida
Smo442850 No alias Cell cycle.cytokinesis.phragmoplast disassembly.Katanin... 0.02 Archaeplastida
Solyc04g008720.4.1 No alias regulatory component of Katanin ATP-dependent... 0.02 Archaeplastida
Zm00001e006531_P001 No alias regulatory component of Katanin ATP-dependent... 0.03 Archaeplastida
Zm00001e041938_P001 No alias regulatory component of Katanin ATP-dependent... 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!