AT4G27090


Description : Ribosomal protein L14


Gene families : OG0002563 (Archaeplastida) Phylogenetic Tree(s): OG0002563_tree ,
OG_05_0002861 (LandPlants) Phylogenetic Tree(s): OG_05_0002861_tree ,
OG_06_0003445 (SeedPlants) Phylogenetic Tree(s): OG_06_0003445_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G27090
Cluster HCCA: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00164470 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.19 Archaeplastida
AMTR_s00067p00096180 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 Archaeplastida
Cpa|evm.model.tig00000194.50 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.29 Archaeplastida
Cre17.g701200 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.29 Archaeplastida
GSVIVT01012876001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 Archaeplastida
GSVIVT01027844001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 Archaeplastida
Gb_21078 No alias component RPL14 of LSU proteome component 0.18 Archaeplastida
LOC_Os02g40880.1 No alias component RPL14 of LSU proteome component 0.34 Archaeplastida
MA_10433933g0010 No alias component RPL14 of LSU proteome component 0.1 Archaeplastida
MA_10434733g0010 No alias component RPL14 of LSU proteome component 0.22 Archaeplastida
MA_37009g0010 No alias component RPL14 of LSU proteome component 0.06 Archaeplastida
MA_99106g0010 No alias component RPL14 of LSU proteome component 0.25 Archaeplastida
Mp8g17070.1 No alias component RPL14 of LSU proteome component 0.31 Archaeplastida
Pp3c15_5860V3.1 No alias Ribosomal protein L14 0.34 Archaeplastida
Pp3c20_860V3.1 No alias Ribosomal protein L14 0.26 Archaeplastida
Pp3c23_22060V3.1 No alias Ribosomal protein L14 0.23 Archaeplastida
Pp3c24_20890V3.1 No alias Ribosomal protein L14 0.35 Archaeplastida
Pp3c8_25050V3.1 No alias Ribosomal protein L14 0.04 Archaeplastida
Smo403602 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 Archaeplastida
Solyc06g008260.3.1 No alias component RPL14 of LSU proteome component 0.3 Archaeplastida
Solyc06g083820.3.1 No alias component RPL14 of LSU proteome component 0.14 Archaeplastida
Solyc09g066430.3.1 No alias component RPL14 of LSU proteome component 0.32 Archaeplastida
Zm00001e010296_P001 No alias component RPL14 of LSU proteome component 0.24 Archaeplastida
Zm00001e034932_P003 No alias component RPL14 of LSU proteome component 0.21 Archaeplastida
Zm00001e041233_P002 No alias component RPL14 of LSU proteome component 0.21 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation RCA Interproscan
MF GO:0003735 structural constituent of ribosome ISS Interproscan
CC GO:0005730 nucleolus IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005773 vacuole IDA Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005840 ribosome ISS Interproscan
BP GO:0006412 translation ISS Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0022625 cytosolic large ribosomal subunit IDA Interproscan
CC GO:0022626 cytosolic ribosome IDA Interproscan
BP GO:0042254 ribosome biogenesis ISS Interproscan
Type GO Term Name Evidence Source
BP GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Neighborhood
BP GO:0000461 endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Neighborhood
BP GO:0000469 cleavage involved in rRNA processing IEP Neighborhood
BP GO:0000478 endonucleolytic cleavage involved in rRNA processing IEP Neighborhood
BP GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Neighborhood
MF GO:0001072 transcription antitermination factor activity, RNA binding IEP Neighborhood
MF GO:0004550 nucleoside diphosphate kinase activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Neighborhood
CC GO:0005758 mitochondrial intermembrane space IEP Neighborhood
CC GO:0005763 mitochondrial small ribosomal subunit IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006626 protein targeting to mitochondrion IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009165 nucleotide biosynthetic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
BP GO:0009260 ribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
BP GO:0009955 adaxial/abaxial pattern specification IEP Neighborhood
CC GO:0015935 small ribosomal subunit IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016572 histone phosphorylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
CC GO:0022627 cytosolic small ribosomal subunit IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030527 structural constituent of chromatin IEP Neighborhood
BP GO:0031125 rRNA 3'-end processing IEP Neighborhood
BP GO:0031554 regulation of DNA-templated transcription, termination IEP Neighborhood
BP GO:0031564 transcription antitermination IEP Neighborhood
CC GO:0031970 organelle envelope lumen IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034644 cellular response to UV IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0042274 ribosomal small subunit biogenesis IEP Neighborhood
BP GO:0043244 regulation of protein complex disassembly IEP Neighborhood
BP GO:0043628 ncRNA 3'-end processing IEP Neighborhood
BP GO:0046390 ribose phosphate biosynthetic process IEP Neighborhood
BP GO:0048569 post-embryonic animal organ development IEP Neighborhood
BP GO:0070585 protein localization to mitochondrion IEP Neighborhood
BP GO:0071493 cellular response to UV-B IEP Neighborhood
BP GO:0072655 establishment of protein localization to mitochondrion IEP Neighborhood
BP GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEP Neighborhood
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002784 Ribosomal_L14e_dom 45 117
No external refs found!