AT4G27120

Description : CONTAINS InterPro DOMAIN/s: DDRGK domain (InterPro:IPR019153); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

Gene families : OG0006633 (Archaeplastida) Phylogenetic Tree(s): OG0006633_tree ,
OG_05_0007040 (LandPlants) Phylogenetic Tree(s): OG_05_0007040_tree ,
OG_06_0007842 (SeedPlants) Phylogenetic Tree(s): OG_06_0007842_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G27120
Cluster	HCCA: Cluster_221

Target	Alias	Description	ECC score	Gene Family Method	Actions
Mp4g06310.1	No alias	DDRGK domain-containing protein 1 OS=Oryza sativa subsp....	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	RCA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0048193	Golgi vesicle transport	RCA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	Neighborhood
BP	GO:0002240	response to molecule of oomycetes origin	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006396	RNA processing	IEP	Neighborhood
BP	GO:0006401	RNA catabolic process	IEP	Neighborhood
BP	GO:0006402	mRNA catabolic process	IEP	Neighborhood
BP	GO:0006417	regulation of translation	IEP	Neighborhood
BP	GO:0006446	regulation of translational initiation	IEP	Neighborhood
MF	GO:0008301	DNA binding, bending	IEP	Neighborhood
BP	GO:0009606	tropism	IEP	Neighborhood
BP	GO:0009626	plant-type hypersensitive response	IEP	Neighborhood
BP	GO:0009629	response to gravity	IEP	Neighborhood
BP	GO:0009630	gravitropism	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0012501	programmed cell death	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
BP	GO:0016071	mRNA metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
BP	GO:0019439	aromatic compound catabolic process	IEP	Neighborhood
BP	GO:0034050	host programmed cell death induced by symbiont	IEP	Neighborhood
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Neighborhood
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Neighborhood
MF	GO:0042162	telomeric DNA binding	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
BP	GO:0046700	heterocycle catabolic process	IEP	Neighborhood
MF	GO:0046982	protein heterodimerization activity	IEP	Neighborhood
BP	GO:0048582	positive regulation of post-embryonic development	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0080050	regulation of seed development	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
BP	GO:2000034	regulation of seed maturation	IEP	Neighborhood
BP	GO:2000243	positive regulation of reproductive process	IEP	Neighborhood
BP	GO:2000693	positive regulation of seed maturation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR019153	DDRGK_dom-contain	94	275

External Links

No external refs found!

AT4G27120

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation