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  5. Pp3c21_12900V3.1

Pp3c21_12900V3.1


Description : SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related


Gene families : OG0000572 (Archaeplastida) Phylogenetic Tree(s): OG0000572_tree ,
OG_05_0002524 (LandPlants) Phylogenetic Tree(s): OG_05_0002524_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c21_12900V3.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00258670 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.03 Archaeplastida
AMTR_s00029p00013990 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.03 Archaeplastida
AMTR_s00040p00226100 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.03 Archaeplastida
Cpa|evm.model.tig00021014.10 No alias DNA repair protein RAD5A OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00021293.7 No alias No description available 0.01 Archaeplastida
GSVIVT01006339001 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
GSVIVT01034370001 No alias Chromatin organisation.chromatin remodeling... 0.04 Archaeplastida
Gb_33076 No alias chromatin remodeling factor (Ris1) 0.06 Archaeplastida
LOC_Os01g57110.1 No alias chromatin remodeling factor (Ris1) 0.03 Archaeplastida
LOC_Os08g08220.1 No alias chromatin remodeling factor (Rad5). chromatin remodeling... 0.03 Archaeplastida
MA_4534g0010 No alias Helicase-like transcription factor CHR28 OS=Arabidopsis... 0.07 Archaeplastida
MA_8870g0010 No alias Helicase-like transcription factor CHR28 OS=Arabidopsis... 0.04 Archaeplastida
Mp8g05230.1 No alias chromatin remodeling factor (Ris1) 0.05 Archaeplastida
Solyc02g050280.4.1 No alias chromatin remodeling factor (Ris1) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!