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  5. Pp3c21_1380V3.1

Pp3c21_1380V3.1


Description : No annotation


Gene families : OG0007698 (Archaeplastida) Phylogenetic Tree(s): OG0007698_tree ,
OG_05_0008397 (LandPlants) Phylogenetic Tree(s): OG_05_0008397_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c21_1380V3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00171600 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
AT3G55250 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 Archaeplastida
Cre03.g183400 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
GSVIVT01032484001 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 Archaeplastida
Mp5g09440.1 No alias assembly factor PSA3 involved in PS-I assembly 0.03 Archaeplastida
Solyc02g086890.3.1 No alias assembly factor PSA3 involved in PS-I assembly 0.03 Archaeplastida
Zm00001e012055_P002 No alias No annotation 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!