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  5. AT4G27230

AT4G27230 (HTA2)


Aliases : HTA2

Description : histone H2A 2


Gene families : OG0000174 (Archaeplastida) Phylogenetic Tree(s): OG0000174_tree ,
OG_05_0000204 (LandPlants) Phylogenetic Tree(s): OG_05_0000204_tree ,
OG_06_0000166 (SeedPlants) Phylogenetic Tree(s): OG_06_0000166_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G27230
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00221900 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
AMTR_s00057p00215390 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2A-type histone 0.07 Archaeplastida
AMTR_s00058p00158560 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
AMTR_s00115p00128810 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2A-type histone 0.1 Archaeplastida
Cre06.g264750 No alias Chromatin organisation.histones.H2A-type histone 0.08 Archaeplastida
Cre06.g264950 No alias Chromatin organisation.histones.H2A-type histone 0.08 Archaeplastida
Cre06.g265350 No alias Chromatin organisation.histones.H2A-type histone 0.07 Archaeplastida
Cre06.g266700 No alias Chromatin organisation.histones.H2A-type histone 0.07 Archaeplastida
Cre06.g268050 No alias Chromatin organisation.histones.H2A-type histone 0.07 Archaeplastida
Cre06.g268300 No alias Chromatin organisation.histones.H2A-type histone 0.07 Archaeplastida
Cre06.g271350 No alias Chromatin organisation.histones.H2A-type histone 0.07 Archaeplastida
Cre06.g273900 No alias Chromatin organisation.histones.H2A-type histone 0.07 Archaeplastida
Cre06.g274200 No alias Chromatin organisation.histones.H2A-type histone 0.07 Archaeplastida
Cre06.g274800 No alias Chromatin organisation.histones.H2A-type histone 0.07 Archaeplastida
Cre06.g275850 No alias Chromatin organisation.histones.H2A-type histone 0.08 Archaeplastida
Cre06.g276500 No alias Chromatin organisation.histones.H2A-type histone 0.07 Archaeplastida
Cre06.g276950 No alias Chromatin organisation.histones.H2A-type histone 0.07 Archaeplastida
Cre12.g504500 No alias Chromatin organisation.histones.H2A-type histone 0.08 Archaeplastida
Cre12.g504750 No alias Chromatin organisation.histones.H2A-type histone 0.07 Archaeplastida
Cre12.g505550 No alias Chromatin organisation.histones.H2A-type histone 0.07 Archaeplastida
Cre12.g506250 No alias Chromatin organisation.histones.H2A-type histone 0.07 Archaeplastida
Cre13.g570100 No alias Chromatin organisation.histones.H2A-type histone 0.08 Archaeplastida
Cre13.g590800 No alias Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
Cre13.g591150 No alias Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
Cre17.g708550 No alias Chromatin organisation.histones.H2A-type histone 0.07 Archaeplastida
Cre17.g709200 No alias Chromatin organisation.histones.H2A-type histone 0.07 Archaeplastida
Cre17.g710400 No alias Chromatin organisation.histones.H2A-type histone 0.08 Archaeplastida
Cre17.g711700 No alias Chromatin organisation.histones.H2A-type histone 0.08 Archaeplastida
Cre17.g713400 No alias Chromatin organisation.histones.H2A-type histone 0.07 Archaeplastida
Cre17.g714500 No alias Chromatin organisation.histones.H2A-type histone 0.09 Archaeplastida
GSVIVT01002735001 No alias Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
GSVIVT01002746001 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
GSVIVT01011034001 No alias Chromatin organisation.histones.H2A-type histone 0.08 Archaeplastida
GSVIVT01014580001 No alias Chromatin organisation.histones.H2A-type histone 0.05 Archaeplastida
GSVIVT01025019001 No alias Chromatin organisation.histones.H2A-type histone 0.04 Archaeplastida
GSVIVT01031123001 No alias Chromatin organisation.histones.H2A-type histone 0.08 Archaeplastida
Gb_06384 No alias histone (H2A) 0.06 Archaeplastida
Gb_07070 No alias histone (H2A) 0.07 Archaeplastida
Gb_12570 No alias histone (H2A) 0.03 Archaeplastida
Gb_25326 No alias histone (H2A) 0.09 Archaeplastida
Gb_37579 No alias histone (H2A) 0.03 Archaeplastida
LOC_Os01g31800.1 No alias histone (H2A) 0.04 Archaeplastida
LOC_Os03g17100.1 No alias histone (H2A) 0.06 Archaeplastida
LOC_Os05g02300.1 No alias histone (H2A) 0.08 Archaeplastida
LOC_Os07g36130.1 No alias histone (H2A) 0.06 Archaeplastida
LOC_Os07g36140.1 No alias histone (H2A) 0.07 Archaeplastida
LOC_Os08g33100.1 No alias histone (H2A) 0.12 Archaeplastida
LOC_Os12g25120.1 No alias histone (H2A) 0.04 Archaeplastida
MA_10425800g0010 No alias histone (H2A) 0.03 Archaeplastida
MA_10426943g0010 No alias histone (H2A) 0.04 Archaeplastida
MA_169054g0020 No alias histone (H2A) 0.06 Archaeplastida
MA_213048g0010 No alias histone (H2A) 0.07 Archaeplastida
MA_22203g0020 No alias histone (H2A) 0.04 Archaeplastida
MA_427046g0010 No alias histone (H2A) 0.04 Archaeplastida
MA_74667g0010 No alias histone (H2A) 0.04 Archaeplastida
MA_962778g0010 No alias histone (H2A) 0.08 Archaeplastida
Mp2g00760.1 No alias histone (H2A) 0.04 Archaeplastida
Mp3g00840.1 No alias histone (H2A) 0.03 Archaeplastida
Mp3g02370.1 No alias histone (H2A) 0.02 Archaeplastida
Pp3c5_1791V3.1 No alias histone H2A 10 0.02 Archaeplastida
Pp3c5_1800V3.1 No alias histone H2A 10 0.02 Archaeplastida
Pp3c6_29410V3.1 No alias histone H2A 10 0.02 Archaeplastida
Smo166626 No alias Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
Smo170948 No alias Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
Smo73637 No alias Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
Smo76653 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Solyc01g099410.3.1 No alias histone (H2A) 0.11 Archaeplastida
Solyc03g005220.4.1 No alias histone (H2A) 0.08 Archaeplastida
Solyc06g084430.4.1 No alias histone (H2A) 0.11 Archaeplastida
Solyc09g010400.3.1 No alias histone (H2A) 0.12 Archaeplastida
Solyc09g074300.1.1 No alias histone (H2A) 0.08 Archaeplastida
Solyc09g082710.3.1 No alias histone (H2A) 0.1 Archaeplastida
Solyc10g006560.4.1 No alias histone (H2A) 0.13 Archaeplastida
Solyc11g073250.2.1 No alias histone (H2A) 0.17 Archaeplastida
Solyc12g005270.2.1 No alias histone (H2A) 0.14 Archaeplastida
Zm00001e010232_P001 No alias histone (H2A) 0.09 Archaeplastida
Zm00001e010515_P001 No alias histone (H2A) 0.07 Archaeplastida
Zm00001e011643_P001 No alias histone (H2A) 0.07 Archaeplastida
Zm00001e012144_P001 No alias histone (H2A) 0.07 Archaeplastida
Zm00001e020483_P001 No alias histone (H2A) 0.06 Archaeplastida
Zm00001e033014_P001 No alias histone (H2A) 0.06 Archaeplastida
Zm00001e034815_P001 No alias histone (H2A) 0.09 Archaeplastida
Zm00001e035183_P002 No alias histone (H2A) 0.08 Archaeplastida
Zm00001e038465_P002 No alias histone (H2A) 0.07 Archaeplastida
Zm00001e039735_P001 No alias histone (H2A) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000304 response to singlet oxygen IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
CC GO:0000790 nuclear chromatin IEP Neighborhood
BP GO:0000911 cytokinesis by cell plate formation IEP Neighborhood
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0001872 (1->3)-beta-D-glucan binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
CC GO:0005911 cell-cell junction IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0006304 DNA modification IEP Neighborhood
BP GO:0006305 DNA alkylation IEP Neighborhood
BP GO:0006306 DNA methylation IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0007000 nucleolus organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007166 cell surface receptor signaling pathway IEP Neighborhood
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP Neighborhood
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Neighborhood
BP GO:0007584 response to nutrient IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0008356 asymmetric cell division IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009506 plasmodesma IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0009582 detection of abiotic stimulus IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0010075 regulation of meristem growth IEP Neighborhood
BP GO:0010091 trichome branching IEP Neighborhood
BP GO:0010305 leaf vascular tissue pattern formation IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016048 detection of temperature stimulus IEP Neighborhood
BP GO:0016925 protein sumoylation IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0030054 cell junction IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
MF GO:0031386 protein tag IEP Neighborhood
BP GO:0031670 cellular response to nutrient IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0032506 cytokinetic process IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0044030 regulation of DNA methylation IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0044728 DNA methylation or demethylation IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
BP GO:0048449 floral organ formation IEP Neighborhood
BP GO:0048653 anther development IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051567 histone H3-K9 methylation IEP Neighborhood
BP GO:0061647 histone H3-K9 modification IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071452 cellular response to singlet oxygen IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:1902410 mitotic cytokinetic process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 13 90
IPR032454 Histone_H2A_C 93 126
No external refs found!