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  5. Pp3c21_16990V3.1

Pp3c21_16990V3.1


Description : Pectate lyase family protein


Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c21_16990V3.1
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00186640 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
AMTR_s00171p00044290 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
AT1G04680 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT1G67750 No alias Pectate lyase family protein 0.03 Archaeplastida
AT3G54920 PMR6 Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT4G24780 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
MA_101171g0010 No alias pectate lyase 0.02 Archaeplastida
MA_10205415g0010 No alias pectate lyase 0.04 Archaeplastida
MA_10332686g0010 No alias pectate lyase 0.03 Archaeplastida
MA_10426822g0020 No alias pectate lyase 0.02 Archaeplastida
MA_10430145g0030 No alias pectate lyase 0.02 Archaeplastida
MA_10437227g0020 No alias pectate lyase 0.02 Archaeplastida
MA_170547g0010 No alias pectate lyase 0.03 Archaeplastida
MA_203992g0010 No alias pectate lyase 0.02 Archaeplastida
MA_394910g0010 No alias Probable pectate lyase 22 OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_62112g0010 No alias pectate lyase 0.02 Archaeplastida
MA_91467g0010 No alias pectate lyase 0.05 Archaeplastida
MA_91467g0020 No alias pectate lyase 0.02 Archaeplastida
MA_956526g0010 No alias pectate lyase 0.02 Archaeplastida
MA_97947g0010 No alias pectate lyase 0.02 Archaeplastida
Mp8g00770.1 No alias pectate lyase 0.03 Archaeplastida
Mp8g10190.1 No alias pectate lyase 0.04 Archaeplastida
Pp3c14_6710V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c1_10180V3.1 No alias Pectin lyase-like superfamily protein 0.06 Archaeplastida
Pp3c1_10470V3.1 No alias Pectin lyase-like superfamily protein 0.07 Archaeplastida
Pp3c1_33130V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c22_19760V3.1 No alias Pectate lyase family protein 0.03 Archaeplastida
Pp3c22_19780V3.1 No alias Pectate lyase family protein 0.03 Archaeplastida
Pp3s38_30V3.1 No alias Pectin lyase-like superfamily protein 0.09 Archaeplastida
Smo407495 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
Solyc02g080910.4.1 No alias pectate lyase 0.02 Archaeplastida
Solyc06g083580.4.1 No alias pectate lyase 0.03 Archaeplastida
Solyc09g061890.3.1 No alias pectate lyase 0.03 Archaeplastida
Zm00001e004654_P002 No alias pectate lyase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!