1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c21_17280V3.1

Pp3c21_17280V3.1


Description : RING/U-box superfamily protein


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c21_17280V3.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00240920 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00129p00065710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G49220 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT1G72220 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT2G01150 RHA2B RING-H2 finger protein 2B 0.02 Archaeplastida
AT5G10380 ATRING1, RING1 RING/U-box superfamily protein 0.03 Archaeplastida
GSVIVT01007793001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01023776001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01027524001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_05381 No alias RHA2 signal transducer of abscisic acid perception 0.03 Archaeplastida
Gb_28973 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.02 Archaeplastida
Gb_28980 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_29602 No alias RHA2 signal transducer of abscisic acid perception 0.02 Archaeplastida
Gb_35557 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_36232 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.02 Archaeplastida
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g55110.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g15020.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g15100.1 No alias RING-H2 finger protein ATL40 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os06g08820.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os07g06560.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os07g42610.1 No alias E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os08g06090.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g37760.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os10g39450.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10435495g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_105610g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_17249g0010 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.02 Archaeplastida
MA_6931619g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_8556123g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9764263g0010 No alias RING-H2 finger protein ATL67 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp7g06030.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Pp3c17_13190V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c22_15440V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c22_17730V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.06 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.05 Archaeplastida
Smo39820 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Smo448587 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc02g038805.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc04g007500.1.1 No alias RHA2 signal transducer of abscisic acid perception 0.03 Archaeplastida
Solyc06g061250.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc06g064440.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e000398_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e010363_P001 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e019438_P001 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e030877_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e031874_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e034469_P001 No alias ubiquitin protein ligase (XERICO) 0.03 Archaeplastida
Zm00001e035560_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e038107_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!