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  5. Pp3c21_350V3.1

Pp3c21_350V3.1


Description : vacuolar protein sorting 26B


Gene families : OG0003294 (Archaeplastida) Phylogenetic Tree(s): OG0003294_tree ,
OG_05_0003221 (LandPlants) Phylogenetic Tree(s): OG_05_0003221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c21_350V3.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT5G53530 VPS26A vacuolar protein sorting 26A 0.02 Archaeplastida
LOC_Os11g41130.2 No alias component VPS26 of Retromer protein recycling complex 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005777 peroxisome IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0035145 exon-exon junction complex IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!