AT4G27690 (VPS26B)


Aliases : VPS26B

Description : vacuolar protein sorting 26B


Gene families : OG0003294 (Archaeplastida) Phylogenetic Tree(s): OG0003294_tree ,
OG_05_0003221 (LandPlants) Phylogenetic Tree(s): OG_05_0003221_tree ,
OG_06_0004444 (SeedPlants) Phylogenetic Tree(s): OG_06_0004444_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G27690
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Zm00001e011074_P002 No alias component VPS26 of Retromer protein recycling complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport ISS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0030244 cellulose biosynthetic process RCA Interproscan
BP GO:0042147 retrograde transport, endosome to Golgi ISS Interproscan
BP GO:0048193 Golgi vesicle transport RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Neighborhood
BP GO:0000913 preprophase band assembly IEP Neighborhood
BP GO:0002097 tRNA wobble base modification IEP Neighborhood
BP GO:0002098 tRNA wobble uridine modification IEP Neighborhood
BP GO:0002213 defense response to insect IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004629 phospholipase C activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005677 chromatin silencing complex IEP Neighborhood
CC GO:0005819 spindle IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006349 regulation of gene expression by genetic imprinting IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006808 regulation of nitrogen utilization IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0008156 negative regulation of DNA replication IEP Neighborhood
BP GO:0008284 positive regulation of cell proliferation IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0008878 glucose-1-phosphate adenylyltransferase activity IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009789 positive regulation of abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009853 photorespiration IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0009967 positive regulation of signal transduction IEP Neighborhood
BP GO:0010082 regulation of root meristem growth IEP Neighborhood
BP GO:0010090 trichome morphogenesis IEP Neighborhood
CC GO:0010170 glucose-1-phosphate adenylyltransferase complex IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0010647 positive regulation of cell communication IEP Neighborhood
BP GO:0010948 negative regulation of cell cycle process IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
BP GO:0016925 protein sumoylation IEP Neighborhood
CC GO:0017053 transcriptional repressor complex IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
MF GO:0019789 SUMO transferase activity IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0023056 positive regulation of signaling IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0030865 cortical cytoskeleton organization IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0032875 regulation of DNA endoreduplication IEP Neighborhood
BP GO:0032876 negative regulation of DNA endoreduplication IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
CC GO:0043076 megasporocyte nucleus IEP Neighborhood
CC GO:0043078 polar nucleus IEP Neighborhood
BP GO:0043094 cellular metabolic compound salvage IEP Neighborhood
BP GO:0045787 positive regulation of cell cycle IEP Neighborhood
BP GO:0045931 positive regulation of mitotic cell cycle IEP Neighborhood
BP GO:0046686 response to cadmium ion IEP Neighborhood
BP GO:0048468 cell development IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0048584 positive regulation of response to stimulus IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051053 negative regulation of DNA metabolic process IEP Neighborhood
MF GO:0051879 Hsp90 protein binding IEP Neighborhood
BP GO:0060250 germ-line stem-cell niche homeostasis IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0071514 genetic imprinting IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
BP GO:0080036 regulation of cytokinin-activated signaling pathway IEP Neighborhood
BP GO:0080038 positive regulation of cytokinin-activated signaling pathway IEP Neighborhood
BP GO:0080050 regulation of seed development IEP Neighborhood
BP GO:0080147 root hair cell development IEP Neighborhood
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Neighborhood
CC GO:0090568 nuclear transcriptional repressor complex IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097472 cyclin-dependent protein kinase activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901421 positive regulation of response to alcohol IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1902503 adenylyltransferase complex IEP Neighborhood
BP GO:1905959 positive regulation of cellular response to alcohol IEP Neighborhood
BP GO:2000014 regulation of endosperm development IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Neighborhood
BP GO:2000280 regulation of root development IEP Neighborhood
InterPro domains Description Start Stop
IPR028934 Vps26-related 8 283
No external refs found!