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  5. Pp3c21_560V3.1

Pp3c21_560V3.1


Description : ARM repeat superfamily protein


Gene families : OG0004168 (Archaeplastida) Phylogenetic Tree(s): OG0004168_tree ,
OG_05_0004926 (LandPlants) Phylogenetic Tree(s): OG_05_0004926_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c21_560V3.1
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00137580 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00049p00137690 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT1G13160 No alias ARM repeat superfamily protein 0.05 Archaeplastida
Cpa|evm.model.tig00000545.36 No alias No description available 0.12 Archaeplastida
Cre06.g277050 No alias No description available 0.17 Archaeplastida
GSVIVT01000585001 No alias No description available 0.12 Archaeplastida
Gb_20290 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os04g53770.1 No alias no hits & (original description: none) 0.15 Archaeplastida
MA_1537g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_29597g0020 No alias no hits & (original description: none) 0.05 Archaeplastida
Smo113277 No alias No description available 0.02 Archaeplastida
Solyc12g099890.2.1 No alias no hits & (original description: none) 0.1 Archaeplastida
Zm00001e006853_P001 No alias no hits & (original description: none) 0.15 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!