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  5. Pp3c21_5650V3.1

Pp3c21_5650V3.1


Description : photosynthetic electron transfer B


Gene families : OG0001809 (Archaeplastida) Phylogenetic Tree(s): OG0001809_tree ,
OG_05_0001335 (LandPlants) Phylogenetic Tree(s): OG_05_0001335_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c21_5650V3.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
ATCG00720 PETB photosynthetic electron transfer B 0.06 Archaeplastida
Gb_36746 No alias Cytochrome b6 OS=Welwitschia mirabilis... 0.04 Archaeplastida
LOC_Os01g57942.1 No alias apocytochrome b component PetB of cytochrome b6/f complex 0.04 Archaeplastida
LOC_Os04g16846.1 No alias apocytochrome b component PetB of cytochrome b6/f complex 0.04 Archaeplastida
LOC_Os10g21324.1 No alias apocytochrome b component PetB of cytochrome b6/f complex 0.04 Archaeplastida
Mp1g00740.1 No alias Cytochrome b6 OS=Marchantia polymorpha... 0.03 Archaeplastida
Smo137714 No alias Cytochrome b6 OS=Pinus thunbergii 0.03 Archaeplastida
Smo139134 No alias Cytochrome b OS=Marchantia polymorpha 0.05 Archaeplastida
Solyc00g500027.1.1 No alias no hits & (original description: none) 0.09 Archaeplastida
Solyc01g017740.2.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc07g032450.1.1 No alias Cytochrome b6 OS=Panax ginseng (sp|q68rx7|cyb6_pangi : 96.7) 0.04 Archaeplastida
Solyc09g050020.3.1 No alias Cytochrome b OS=Vicia faba (sp|p05718|cyb_vicfa : 382.0) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
CC GO:0009521 photosystem IEA Interproscan
BP GO:0009767 photosynthetic electron transport chain IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016168 chlorophyll binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0019684 photosynthesis, light reaction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005797 Cyt_b/b6_N 154 309
IPR000932 PS_antenna-like 1 117
No external refs found!