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  5. Pp3c21_5670V3.1

Pp3c21_5670V3.1


Description : photosynthetic electron transfer D


Gene families : OG0007254 (Archaeplastida) Phylogenetic Tree(s): OG0007254_tree ,
OG_05_0006833 (LandPlants) Phylogenetic Tree(s): OG_05_0006833_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c21_5670V3.1
Cluster HCCA: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
ATCG00730 PETD photosynthetic electron transfer D 0.06 Archaeplastida
Gb_03953 No alias component PetD/IV of cytochrome b6/f complex 0.03 Archaeplastida
LOC_Os01g57945.1 No alias component PetD/IV of cytochrome b6/f complex 0.03 Archaeplastida
LOC_Os04g16844.1 No alias component PetD/IV of cytochrome b6/f complex 0.03 Archaeplastida
LOC_Os10g21326.1 No alias component PetD/IV of cytochrome b6/f complex 0.03 Archaeplastida
Smo137742 No alias Cytochrome b6-f complex subunit 4 OS=Picea abies 0.02 Archaeplastida
Solyc00g500028.1.1 No alias Cytochrome b6-f complex subunit 4 OS=Nymphaea alba... 0.07 Archaeplastida
Solyc00g500073.1.1 No alias Cytochrome b6 OS=Helianthus annuus (sp|q1kxs9|cyb6_helan : 261.0) 0.05 Archaeplastida
Solyc00g500158.1.1 No alias component PetD/IV of cytochrome b6/f complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!