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  5. Pp3c22_14940V3.1

Pp3c22_14940V3.1


Description : 4-hydroxy-3-methylbut-2-enyl diphosphate synthase


Gene families : OG0003732 (Archaeplastida) Phylogenetic Tree(s): OG0003732_tree ,
OG_05_0004516 (LandPlants) Phylogenetic Tree(s): OG_05_0004516_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_14940V3.1
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
Pp3c19_16320V3.1 No alias 4-hydroxy-3-methylbut-2-enyl diphosphate synthase 0.02 Archaeplastida
Solyc11g069380.2.1 No alias 4-hydroxy-3-methylbut-2-enyl diphosphate synthase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!