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  5. Pp3c22_16160V3.1

Pp3c22_16160V3.1


Description : photosystem II reaction center W


Gene families : OG0005301 (Archaeplastida) Phylogenetic Tree(s): OG0005301_tree ,
OG_05_0004077 (LandPlants) Phylogenetic Tree(s): OG_05_0004077_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_16160V3.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00266120 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.04 Archaeplastida
AT2G30570 PSBW photosystem II reaction center W 0.05 Archaeplastida
GSVIVT01000743001 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.02 Archaeplastida
LOC_Os01g56680.2 No alias component PsbW of PS-II complex 0.03 Archaeplastida
LOC_Os05g43310.1 No alias component PsbW of PS-II complex 0.01 Archaeplastida
MA_10431532g0010 No alias component PsbW of PS-II complex 0.01 Archaeplastida
Mp5g14190.1 No alias component PsbW of PS-II complex 0.03 Archaeplastida
Pp3c18_6770V3.1 No alias photosystem II reaction center W 0.06 Archaeplastida
Pp3c18_6780V3.1 No alias photosystem II reaction center W 0.06 Archaeplastida
Pp3c22_16330V3.1 No alias photosystem II reaction center W 0.06 Archaeplastida
Solyc06g084050.4.1 No alias component PsbW of PS-II complex 0.04 Archaeplastida
Solyc09g065910.3.1 No alias component PsbW of PS-II complex 0.03 Archaeplastida
Zm00001e019660_P002 No alias component PsbW of PS-II complex 0.02 Archaeplastida
Zm00001e027386_P002 No alias component PsbW of PS-II complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!