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  5. AT4G28230

AT4G28230


Description : unknown protein; Has 444 Blast hits to 358 proteins in 107 species: Archae - 0; Bacteria - 20; Metazoa - 179; Fungi - 26; Plants - 38; Viruses - 2; Other Eukaryotes - 179 (source: NCBI BLink).


Gene families : OG0015422 (Archaeplastida) Phylogenetic Tree(s): OG0015422_tree ,
OG_05_0015266 (LandPlants) Phylogenetic Tree(s): OG_05_0015266_tree ,
OG_06_0014951 (SeedPlants) Phylogenetic Tree(s): OG_06_0014951_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G28230
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00270360 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
GSVIVT01030006001 No alias No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000913 preprophase band assembly IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003691 double-stranded telomeric DNA binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004702 obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
MF GO:0008022 protein C-terminus binding IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0009554 megasporogenesis IEP Neighborhood
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0010058 regulation of atrichoblast fate specification IEP Neighborhood
BP GO:0010059 positive regulation of atrichoblast fate specification IEP Neighborhood
BP GO:0010061 regulation of trichoblast fate specification IEP Neighborhood
BP GO:0010063 positive regulation of trichoblast fate specification IEP Neighborhood
BP GO:0010071 root meristem specification IEP Neighborhood
BP GO:0010252 auxin homeostasis IEP Neighborhood
BP GO:0010305 leaf vascular tissue pattern formation IEP Neighborhood
BP GO:0010453 regulation of cell fate commitment IEP Neighborhood
BP GO:0010455 positive regulation of cell fate commitment IEP Neighborhood
BP GO:0010564 regulation of cell cycle process IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
CC GO:0019005 SCF ubiquitin ligase complex IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Neighborhood
CC GO:0030863 cortical cytoskeleton IEP Neighborhood
BP GO:0030865 cortical cytoskeleton organization IEP Neighborhood
CC GO:0030981 cortical microtubule cytoskeleton IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0042023 DNA endoreduplication IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
MF GO:0042162 telomeric DNA binding IEP Neighborhood
BP GO:0042659 regulation of cell fate specification IEP Neighborhood
BP GO:0042660 positive regulation of cell fate specification IEP Neighborhood
MF GO:0043047 single-stranded telomeric DNA binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044786 cell cycle DNA replication IEP Neighborhood
BP GO:0045597 positive regulation of cell differentiation IEP Neighborhood
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0048367 shoot system development IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0048731 system development IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051026 chiasma assembly IEP Neighborhood
BP GO:0051094 positive regulation of developmental process IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051240 positive regulation of multicellular organismal process IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0098847 sequence-specific single stranded DNA binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
BP GO:1903888 regulation of plant epidermal cell differentiation IEP Neighborhood
BP GO:1903890 positive regulation of plant epidermal cell differentiation IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP Neighborhood
BP GO:1905421 regulation of plant organ morphogenesis IEP Neighborhood
BP GO:1905423 positive regulation of plant organ morphogenesis IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000038 regulation of stomatal complex development IEP Neighborhood
BP GO:2000067 regulation of root morphogenesis IEP Neighborhood
BP GO:2000123 positive regulation of stomatal complex development IEP Neighborhood
BP GO:2000280 regulation of root development IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!