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  5. Pp3c22_17770V3.1

Pp3c22_17770V3.1


Description : expansin B3


Gene families : OG0000383 (Archaeplastida) Phylogenetic Tree(s): OG0000383_tree ,
OG_05_0000369 (LandPlants) Phylogenetic Tree(s): OG_05_0000369_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_17770V3.1
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AT4G28250 EXPB3, ATEXPB3,... expansin B3 0.06 Archaeplastida
LOC_Os02g42650.1 No alias beta-class expansin 0.02 Archaeplastida
LOC_Os04g44780.1 No alias Expansin-B17 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os10g40090.1 No alias Expansin-B9 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os10g40720.1 No alias Expansin-B3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os10g40730.1 No alias Expansin-B4 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_10427897g0010 No alias beta-class expansin 0.02 Archaeplastida
MA_9323664g0010 No alias Expansin-B3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c17_12970V3.1 No alias expansin B3 0.03 Archaeplastida
Pp3c17_12980V3.1 No alias expansin B3 0.04 Archaeplastida
Pp3c1_37980V3.1 No alias expansin B3 0.02 Archaeplastida
Pp3c22_630V3.1 No alias expansin B3 0.05 Archaeplastida
Solyc01g090820.2.1 No alias Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Solyc10g008440.3.1 No alias beta-class expansin 0.03 Archaeplastida
Solyc10g018500.1.1 No alias Putative expansin-B2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e007438_P001 No alias beta-class expansin 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!