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  5. Pp3c22_17820V3.1

Pp3c22_17820V3.1


Description : nonsense-mediated mRNA decay NMD3 family protein


Gene families : OG0004088 (Archaeplastida) Phylogenetic Tree(s): OG0004088_tree ,
OG_05_0004208 (LandPlants) Phylogenetic Tree(s): OG_05_0004208_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_17820V3.1
Cluster HCCA: Cluster_290

Target Alias Description ECC score Gene Family Method Actions
AT2G03820 No alias nonsense-mediated mRNA decay NMD3 family protein 0.04 Archaeplastida
Cre15.g640250 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
GSVIVT01026308001 No alias No description available 0.03 Archaeplastida
Zm00001e037797_P001 No alias pre-60S subunit nuclear export factor (NMD3) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!