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  5. Pp3c22_17920V3.1

Pp3c22_17920V3.1


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG0002497 (Archaeplastida) Phylogenetic Tree(s): OG0002497_tree ,
OG_05_0002542 (LandPlants) Phylogenetic Tree(s): OG_05_0002542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_17920V3.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00063600 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
AMTR_s00101p00099400 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
AT3G01340 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 12 42
IPR001680 WD40_repeat 56 92
IPR001680 WD40_repeat 208 247
IPR001680 WD40_repeat 155 198
IPR001680 WD40_repeat 104 138
No external refs found!