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Description : sigma factor E
Gene families : OG0000365 (Archaeplastida) Phylogenetic Tree(s): OG0000365_tree ,
OG_05_0006432 (LandPlants) Phylogenetic Tree(s): OG_05_0006432_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c22_18520V3.1 | |
| Cluster | HCCA: Cluster_32 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00015p00252960 | evm_27.TU.AmTr_v1... | RNA biosynthesis.organelle... | 0.02 | Archaeplastida | |
| AMTR_s00056p00209700 | evm_27.TU.AmTr_v1... | RNA biosynthesis.organelle... | 0.03 | Archaeplastida | |
| AT1G64860 | SIGB, SIG2,... | sigma factor A | 0.05 | Archaeplastida | |
| AT3G53920 | SIGC, SIG3 | RNApolymerase sigma-subunit C | 0.03 | Archaeplastida | |
| AT5G24120 | ATSIG5, SIG5, SIGE | sigma factor E | 0.1 | Archaeplastida | |
| Cre03.g194950 | No alias | RNA biosynthesis.organelle... | 0.02 | Archaeplastida | |
| GSVIVT01024261001 | No alias | RNA biosynthesis.organelle... | 0.03 | Archaeplastida | |
| GSVIVT01028717001 | No alias | RNA biosynthesis.organelle... | 0.03 | Archaeplastida | |
| Gb_03878 | No alias | basal transcription factor (Sigma) | 0.03 | Archaeplastida | |
| Gb_05479 | No alias | basal transcription factor (Sigma) | 0.03 | Archaeplastida | |
| Gb_40730 | No alias | basal transcription factor (Sigma) | 0.04 | Archaeplastida | |
| LOC_Os03g16430.1 | No alias | basal transcription factor (Sigma) | 0.03 | Archaeplastida | |
| LOC_Os05g50930.1 | No alias | basal transcription factor (Sigma) | 0.06 | Archaeplastida | |
| LOC_Os08g06630.1 | No alias | basal transcription factor (Sigma) | 0.05 | Archaeplastida | |
| Mp7g15030.1 | No alias | basal transcription factor (Sigma) | 0.03 | Archaeplastida | |
| Pp3c2_5110V3.1 | No alias | RNApolymerase sigma subunit 2 | 0.04 | Archaeplastida | |
| Smo117159 | No alias | RNA biosynthesis.organelle... | 0.02 | Archaeplastida | |
| Smo147096 | No alias | RNA biosynthesis.organelle... | 0.02 | Archaeplastida | |
| Solyc03g007370.3.1 | No alias | basal transcription factor (Sigma) | 0.05 | Archaeplastida | |
| Solyc06g072710.3.1 | No alias | basal transcription factor (Sigma) | 0.07 | Archaeplastida | |
| Zm00001e011616_P008 | No alias | basal transcription factor (Sigma) | 0.03 | Archaeplastida | |
| Zm00001e021683_P001 | No alias | basal transcription factor (Sigma) | 0.02 | Archaeplastida | |
| Zm00001e032596_P002 | No alias | basal transcription factor (Sigma) | 0.06 | Archaeplastida | |
| Zm00001e040174_P003 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0010309 | acireductone dioxygenase [iron(II)-requiring] activity | IEP | Neighborhood |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Neighborhood |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Neighborhood |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Neighborhood |
| MF | GO:0051213 | dioxygenase activity | IEP | Neighborhood |
| MF | GO:0071949 | FAD binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |