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  5. Pp3c22_19780V3.1

Pp3c22_19780V3.1


Description : Pectate lyase family protein


Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0032329 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_19780V3.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00186640 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
AMTR_s00078p00106380 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
AMTR_s00171p00044290 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.04 Archaeplastida
AT1G04680 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT1G14420 AT59 Pectate lyase family protein 0.04 Archaeplastida
AT1G67750 No alias Pectate lyase family protein 0.03 Archaeplastida
AT2G02720 No alias Pectate lyase family protein 0.06 Archaeplastida
AT3G01270 No alias Pectate lyase family protein 0.04 Archaeplastida
AT3G24230 No alias Pectate lyase family protein 0.03 Archaeplastida
AT3G53190 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT5G15110 No alias Pectate lyase family protein 0.03 Archaeplastida
GSVIVT01008053001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.05 Archaeplastida
GSVIVT01011348001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.05 Archaeplastida
GSVIVT01014682001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
GSVIVT01020067001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.05 Archaeplastida
GSVIVT01020068001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.04 Archaeplastida
GSVIVT01024239001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
Gb_19802 No alias pectate lyase 0.02 Archaeplastida
LOC_Os02g12300.1 No alias pectate lyase 0.05 Archaeplastida
LOC_Os04g05050.1 No alias pectate lyase 0.03 Archaeplastida
LOC_Os06g38510.2 No alias pectate lyase 0.03 Archaeplastida
MA_101171g0010 No alias pectate lyase 0.02 Archaeplastida
MA_10205415g0010 No alias pectate lyase 0.03 Archaeplastida
MA_10426822g0020 No alias pectate lyase 0.02 Archaeplastida
MA_10429028g0020 No alias pectate lyase 0.02 Archaeplastida
MA_10430145g0020 No alias pectate lyase 0.03 Archaeplastida
MA_10430145g0030 No alias pectate lyase 0.03 Archaeplastida
MA_10437227g0020 No alias pectate lyase 0.02 Archaeplastida
MA_170547g0010 No alias pectate lyase 0.03 Archaeplastida
MA_204440g0010 No alias Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... 0.03 Archaeplastida
MA_394910g0010 No alias Probable pectate lyase 22 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_62112g0010 No alias pectate lyase 0.02 Archaeplastida
MA_66914g0010 No alias pectate lyase 0.02 Archaeplastida
MA_91467g0010 No alias pectate lyase 0.03 Archaeplastida
MA_91467g0020 No alias pectate lyase 0.02 Archaeplastida
MA_956526g0010 No alias pectate lyase 0.02 Archaeplastida
MA_97947g0010 No alias pectate lyase 0.02 Archaeplastida
Mp8g00770.1 No alias pectate lyase 0.06 Archaeplastida
Mp8g10190.1 No alias pectate lyase 0.03 Archaeplastida
Pp3c10_20140V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c17_16370V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c1_10180V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c1_10470V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c1_33130V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c1_35100V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c21_16990V3.1 No alias Pectate lyase family protein 0.03 Archaeplastida
Pp3c2_9460V3.1 No alias Pectate lyase family protein 0.04 Archaeplastida
Pp3c3_20320V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c3_35190V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3s38_30V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Smo407495 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.05 Archaeplastida
Solyc06g071020.3.1 No alias pectate lyase 0.03 Archaeplastida
Solyc06g071840.3.1 No alias Probable pectate lyase 22 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc06g083580.4.1 No alias pectate lyase 0.02 Archaeplastida
Solyc09g061890.3.1 No alias pectate lyase 0.04 Archaeplastida
Solyc11g008140.3.1 No alias pectate lyase 0.03 Archaeplastida
Zm00001e004654_P002 No alias pectate lyase 0.03 Archaeplastida
Zm00001e024959_P001 No alias pectate lyase 0.02 Archaeplastida
Zm00001e037311_P001 No alias pectate lyase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR002022 Pec_lyase 320 479
No external refs found!