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  5. Pp3c22_19980V3.1

Pp3c22_19980V3.1


Description : HIT zinc finger ;PAPA-1-like conserved region


Gene families : OG0003126 (Archaeplastida) Phylogenetic Tree(s): OG0003126_tree ,
OG_05_0002763 (LandPlants) Phylogenetic Tree(s): OG_05_0002763_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_19980V3.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT2G47350 No alias HIT zinc finger ;PAPA-1-like conserved region 0.04 Archaeplastida
LOC_Os03g59680.1 No alias component IES2 of INO80 chromatin remodeling complex 0.02 Archaeplastida
MA_29452g0010 No alias component IES2 of INO80 chromatin remodeling complex 0.02 Archaeplastida
Mp4g15620.1 No alias component IES2 of INO80 chromatin remodeling complex 0.02 Archaeplastida
Solyc01g100540.4.1 No alias component IES2 of INO80 chromatin remodeling complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!