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  5. AT4G28430

AT4G28430


Description : Reticulon family protein


Gene families : OG0003270 (Archaeplastida) Phylogenetic Tree(s): OG0003270_tree ,
OG_05_0002482 (LandPlants) Phylogenetic Tree(s): OG_05_0002482_tree ,
OG_06_0002417 (SeedPlants) Phylogenetic Tree(s): OG_06_0002417_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G28430
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00213680 evm_27.TU.AmTr_v1... Reticulon-like protein B18 OS=Arabidopsis thaliana 0.06 Archaeplastida
AT2G20590 No alias Reticulon family protein 0.04 Archaeplastida
GSVIVT01020595001 No alias Reticulon-like protein B17 OS=Arabidopsis thaliana 0.09 Archaeplastida
LOC_Os02g19990.1 No alias Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_22853g0010 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp1g14200.1 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Smo405772 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
Solyc07g053700.4.1 No alias Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.12 Archaeplastida
Zm00001e024730_P001 No alias Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.07 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005783 endoplasmic reticulum ISS Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000280 nuclear division IEP Neighborhood
BP GO:0000911 cytokinesis by cell plate formation IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
BP GO:0007346 regulation of mitotic cell cycle IEP Neighborhood
MF GO:0008195 phosphatidate phosphatase activity IEP Neighborhood
BP GO:0010088 phloem development IEP Neighborhood
BP GO:0010232 vascular transport IEP Neighborhood
BP GO:0010233 phloem transport IEP Neighborhood
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP Neighborhood
BP GO:0010440 stomatal lineage progression IEP Neighborhood
BP GO:0010564 regulation of cell cycle process IEP Neighborhood
BP GO:0010583 response to cyclopentenone IEP Neighborhood
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
CC GO:0016324 apical plasma membrane IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
BP GO:0016572 histone phosphorylation IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022622 root system development IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0032506 cytokinetic process IEP Neighborhood
MF GO:0033612 receptor serine/threonine kinase binding IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0044770 cell cycle phase transition IEP Neighborhood
BP GO:0044772 mitotic cell cycle phase transition IEP Neighborhood
BP GO:0044843 cell cycle G1/S phase transition IEP Neighborhood
BP GO:0048316 seed development IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
MF GO:0097472 cyclin-dependent protein kinase activity IEP Neighborhood
CC GO:0098590 plasma membrane region IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
BP GO:1901987 regulation of cell cycle phase transition IEP Neighborhood
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Neighborhood
BP GO:1902410 mitotic cytokinetic process IEP Neighborhood
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR003388 Reticulon 196 351
No external refs found!