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  5. Pp3c22_3550V3.1

Pp3c22_3550V3.1


Description : expansin A14


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0090792 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_3550V3.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00063420 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Gb_07424 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os02g16809.1 No alias alpha-class expansin 0.03 Archaeplastida
MA_10020g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_10434805g0030 No alias alpha-class expansin 0.02 Archaeplastida
Mp1g22700.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g10120.1 No alias alpha-class expansin 0.02 Archaeplastida
Pp3c12_4560V3.1 No alias expansin A9 0.03 Archaeplastida
Pp3c21_1940V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c8_870V3.1 No alias expansin A1 0.03 Archaeplastida
Smo419575 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Solyc03g115310.1.1 No alias alpha-class expansin 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!