AT4G28560 (RIC7)

Aliases : RIC7

Description : ROP-interactive CRIB motif-containing protein 7

Gene families : OG0001712 (Archaeplastida) Phylogenetic Tree(s): OG0001712_tree ,
OG_05_0001139 (LandPlants) Phylogenetic Tree(s): OG_05_0001139_tree ,
OG_06_0006708 (SeedPlants) Phylogenetic Tree(s): OG_06_0006708_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G28560
Cluster	HCCA: Cluster_31

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00257820	evm_27.TU.AmTr_v1...	Phytohormones.signalling peptides.CRP...	0.03	Archaeplastida
AMTR_s00067p00100740	evm_27.TU.AmTr_v1...	Piriformospora indica-insensitive protein 2...	0.02	Archaeplastida
AMTR_s00162p00041240	evm_27.TU.AmTr_v1...	Phytohormones.signalling peptides.CRP...	0.04	Archaeplastida
Gb_16004	No alias	EPF-peptide receptor (TMM)	0.06	Archaeplastida
LOC_Os01g52880.1	No alias	Receptor like protein 29 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os05g45430.1	No alias	Receptor like protein 29 OS=Arabidopsis thaliana...	0.04	Archaeplastida
LOC_Os06g42220.1	No alias	Protein TOO MANY MOUTHS OS=Arabidopsis thaliana...	0.04	Archaeplastida
MA_131671g0010	No alias	EPF-peptide receptor (TMM)	0.04	Archaeplastida
Pp3c23_19100V3.1	No alias	receptor like protein 29	0.03	Archaeplastida
Pp3c24_6450V3.1	No alias	receptor like protein 29	0.03	Archaeplastida
Pp3c8_14320V3.1	No alias	receptor like protein 29	0.05	Archaeplastida
Smo126823	No alias	Phytohormones.signalling peptides.CRP...	0.03	Archaeplastida
Smo33330	No alias	Phytohormones.signalling peptides.CRP...	0.04	Archaeplastida
Solyc09g072630.3.1	No alias	Piriformospora indica-insensitive protein 2...	0.08	Archaeplastida
Zm00001e031937_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0002237	response to molecule of bacterial origin	RCA	Interproscan
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0007165	signal transduction	RCA	Interproscan
BP	GO:0007165	signal transduction	IC	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009860	pollen tube growth	IMP	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010103	stomatal complex morphogenesis	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
CC	GO:0016324	apical plasma membrane	IDA	Interproscan
BP	GO:0022414	reproductive process	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031225	anchored component of membrane	TAS	Interproscan
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032989	cellular component morphogenesis	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044459	plasma membrane part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048437	floral organ development	None	Extended
BP	GO:0048443	stamen development	RCA	Interproscan
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090626	plant epidermis morphogenesis	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
CC	GO:0098590	plasma membrane region	None	Extended
BP	GO:0099402	plant organ development	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001708	cell fate specification	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0004519	endonuclease activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004888	transmembrane signaling receptor activity	IEP	Neighborhood
BP	GO:0006308	DNA catabolic process	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
MF	GO:0008810	cellulase activity	IEP	Neighborhood
BP	GO:0009553	embryo sac development	IEP	Neighborhood
BP	GO:0009556	microsporogenesis	IEP	Neighborhood
BP	GO:0009624	response to nematode	IEP	Neighborhood
BP	GO:0009664	plant-type cell wall organization	IEP	Neighborhood
BP	GO:0009827	plant-type cell wall modification	IEP	Neighborhood
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	Neighborhood
BP	GO:0010050	vegetative phase change	IEP	Neighborhood
BP	GO:0010093	specification of floral organ identity	IEP	Neighborhood
BP	GO:0010234	anther wall tapetum cell fate specification	IEP	Neighborhood
BP	GO:0010252	auxin homeostasis	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0016246	RNA interference	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0019199	transmembrane receptor protein kinase activity	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0034293	sexual sporulation	IEP	Neighborhood
BP	GO:0035194	posttranscriptional gene silencing by RNA	IEP	Neighborhood
MF	GO:0038023	signaling receptor activity	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0043934	sporulation	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
BP	GO:0048236	plant-type sporogenesis	IEP	Neighborhood
BP	GO:0048440	carpel development	IEP	Neighborhood
BP	GO:0048441	petal development	IEP	Neighborhood
BP	GO:0048444	floral organ morphogenesis	IEP	Neighborhood
BP	GO:0048446	petal morphogenesis	IEP	Neighborhood
BP	GO:0048481	plant ovule development	IEP	Neighborhood
BP	GO:0048507	meristem development	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0051321	meiotic cell cycle	IEP	Neighborhood
BP	GO:0065001	specification of axis polarity	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	Neighborhood
BP	GO:0090701	specification of plant organ identity	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:1905392	plant organ morphogenesis	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	299	313
IPR001611	Leu-rich_rpt	178	236

External Links

No external refs found!

AT4G28560 (RIC7)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation