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  5. Pp3c22_6380V3.1

Pp3c22_6380V3.1


Description : carotenoid cleavage dioxygenase 1


Gene families : OG0000267 (Archaeplastida) Phylogenetic Tree(s): OG0000267_tree ,
OG_05_0003817 (LandPlants) Phylogenetic Tree(s): OG_05_0003817_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_6380V3.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00255760 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.terpenoid... 0.02 Archaeplastida
AMTR_s00022p00253450 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.terpenoid... 0.02 Archaeplastida
AT3G63520 ATCCD1, CCD1,... carotenoid cleavage dioxygenase 1 0.05 Archaeplastida
AT4G19170 CCD4, NCED4 nine-cis-epoxycarotenoid dioxygenase 4 0.04 Archaeplastida
Cpa|evm.model.tig00001128.6 No alias No description available 0.02 Archaeplastida
Cre03.g149650 No alias Carotenoid 9,10(9,10)-cleavage dioxygenase 1... 0.03 Archaeplastida
GSVIVT01036862001 No alias Probable carotenoid cleavage dioxygenase 4,... 0.02 Archaeplastida
LOC_Os12g44310.1 No alias carotenoid cleavage dioxygenase (CCD1) 0.05 Archaeplastida
MA_10435932g0010 No alias carotenoid cleavage dioxygenase (CCD1) 0.04 Archaeplastida
MA_90573g0010 No alias carotenoid cleavage dioxygenase (CCD4) 0.02 Archaeplastida
MA_906445g0010 No alias No annotation 0.03 Archaeplastida
Smo272067 No alias Secondary metabolism.terpenoids.terpenoid... 0.02 Archaeplastida
Solyc08g075490.4.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!