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  5. Pp3c22_7200V3.1

Pp3c22_7200V3.1


Description : Radical SAM superfamily protein


Gene families : OG0001760 (Archaeplastida) Phylogenetic Tree(s): OG0001760_tree ,
OG_05_0006296 (LandPlants) Phylogenetic Tree(s): OG_05_0006296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_7200V3.1
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
AT5G08415 No alias Radical SAM superfamily protein 0.04 Archaeplastida
Gb_18137 No alias Enzyme classification.EC_2 transferases.EC_2.8... 0.04 Archaeplastida
LOC_Os01g56310.1 No alias Lipoyl synthase 1, chloroplastic OS=Oryza sativa subsp.... 0.02 Archaeplastida
Solyc12g099700.3.1 No alias Lipoyl synthase, chloroplastic OS=Ricinus communis... 0.02 Archaeplastida
Zm00001e019700_P001 No alias Lipoyl synthase 2, chloroplastic OS=Zea mays... 0.03 Archaeplastida
Zm00001e028978_P001 No alias Lipoyl synthase 1, chloroplastic OS=Zea mays... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!