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  5. Pp3c22_7700V3.1

Pp3c22_7700V3.1


Description : No annotation


Gene families : OG0005665 (Archaeplastida) Phylogenetic Tree(s): OG0005665_tree ,
OG_05_0005476 (LandPlants) Phylogenetic Tree(s): OG_05_0005476_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_7700V3.1
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00038730 evm_27.TU.AmTr_v1... Ribosome biogenesis protein NOP53 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT2G40430 No alias CONTAINS InterPro DOMAIN/s: P60-like... 0.02 Archaeplastida
Cre07.g348250 No alias Ribosome biogenesis protein NOP53 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os05g05220.1 No alias pre-60S ribosomal subunit assembly factor (SMO4) 0.02 Archaeplastida
Solyc02g068420.4.1 No alias pre-60S ribosomal subunit assembly factor (SMO4) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR011687 Nop53/GLTSCR2 10 356
No external refs found!