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  5. Pp3c22_8680V3.1

Pp3c22_8680V3.1


Description : Histone superfamily protein


Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree ,
OG_05_0000124 (LandPlants) Phylogenetic Tree(s): OG_05_0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c22_8680V3.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00044250 No alias Chromatin organisation.histones.H3-type histone 0.04 Archaeplastida
AT1G01370 HTR12, CENH3 Histone superfamily protein 0.03 Archaeplastida
AT1G09200 No alias Histone superfamily protein 0.06 Archaeplastida
AT3G27360 No alias Histone superfamily protein 0.04 Archaeplastida
AT4G40030 No alias Histone superfamily protein 0.02 Archaeplastida
AT5G10390 No alias Histone superfamily protein 0.06 Archaeplastida
AT5G10400 No alias Histone superfamily protein 0.04 Archaeplastida
AT5G65360 No alias Histone superfamily protein 0.06 Archaeplastida
Cre02.g104800 No alias Histone H3 OS=Volvox carteri 0.02 Archaeplastida
Cre06.g264650 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.01 Archaeplastida
GSVIVT01025316001 No alias Histone H3.2 OS=Pisum sativum 0.05 Archaeplastida
GSVIVT01025318001 No alias Histone H3.2 OS=Pisum sativum 0.06 Archaeplastida
GSVIVT01026582001 No alias Histone H3.2 OS=Pisum sativum 0.06 Archaeplastida
GSVIVT01027073001 No alias Cell cycle.mitosis and meiosis.chromosome... 0.02 Archaeplastida
GSVIVT01032047001 No alias Histone H3 OS=Volvox carteri 0.07 Archaeplastida
GSVIVT01034510001 No alias Histone H3.2 OS=Pisum sativum 0.02 Archaeplastida
Gb_15586 No alias histone (H3) 0.02 Archaeplastida
Gb_27618 No alias histone (H3) 0.05 Archaeplastida
Gb_29026 No alias histone (H3) 0.03 Archaeplastida
Gb_29027 No alias histone (H3) 0.07 Archaeplastida
Gb_30564 No alias histone (H3) 0.01 Archaeplastida
Gb_36661 No alias histone (H3) 0.01 Archaeplastida
LOC_Os01g64640.1 No alias histone (H3) 0.04 Archaeplastida
LOC_Os04g34240.1 No alias histone (H3) 0.03 Archaeplastida
LOC_Os05g36280.1 No alias histone (H3) 0.02 Archaeplastida
LOC_Os05g41080.1 No alias histone H3 variant (CENH3) 0.03 Archaeplastida
LOC_Os06g04030.1 No alias histone (H3) 0.02 Archaeplastida
LOC_Os06g06510.1 No alias histone (H3) 0.02 Archaeplastida
LOC_Os11g05730.1 No alias histone (H3) 0.03 Archaeplastida
MA_10432805g0020 No alias histone (H3) 0.03 Archaeplastida
MA_1527811g0010 No alias No annotation 0.01 Archaeplastida
MA_197719g0010 No alias histone (H3) 0.02 Archaeplastida
MA_210354g0010 No alias histone (H3) 0.03 Archaeplastida
MA_356208g0010 No alias histone (H3) 0.03 Archaeplastida
MA_56411g0010 No alias histone (H3) 0.02 Archaeplastida
MA_871602g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp3g07730.1 No alias histone (H3) 0.03 Archaeplastida
Mp7g10700.1 No alias histone (H3) 0.04 Archaeplastida
Mp7g10730.1 No alias histone (H3) 0.02 Archaeplastida
Mp7g16200.1 No alias histone (H3) 0.03 Archaeplastida
Mp7g18030.1 No alias histone (H3) 0.02 Archaeplastida
Smo103546 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Smo171192 No alias Cell cycle.mitosis and meiosis.chromosome... 0.02 Archaeplastida
Smo438193 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Smo78992 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Solyc01g074000.3.1 No alias histone (H3) 0.03 Archaeplastida
Solyc01g079110.4.1 No alias histone (H3) 0.04 Archaeplastida
Solyc01g080600.4.1 No alias histone (H3) 0.05 Archaeplastida
Solyc01g086820.4.1 No alias histone (H3) 0.05 Archaeplastida
Solyc01g095650.4.1 No alias histone H3 variant (CENH3) 0.03 Archaeplastida
Solyc02g077480.1.1 No alias histone (H3) 0.06 Archaeplastida
Solyc05g051500.4.1 No alias histone (H3) 0.02 Archaeplastida
Solyc10g008910.1.1 No alias histone (H3) 0.02 Archaeplastida
Zm00001e008160_P001 No alias histone (H3) 0.02 Archaeplastida
Zm00001e016861_P001 No alias histone (H3) 0.02 Archaeplastida
Zm00001e019170_P001 No alias histone (H3) 0.03 Archaeplastida
Zm00001e029901_P001 No alias histone (H3) 0.02 Archaeplastida
Zm00001e040856_P001 No alias histone (H3) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
CC GO:0061617 MICOS complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!